eF-site ID 6w1q-C
PDB Code 6w1q
Chain C

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Title RT XFEL structure of Photosystem II 50 microseconds after the second illumination at 2.27 Angstrom resolution
Classification PHOTOSYNTHESIS
Compound Photosystem II protein D1 1
Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus (strain BP-1);
Sequence C:  GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMTLFE
LAHFIPEKPMYEQGLILIPHIATLGWGVGPGGEVVDTFPF
FVVGVVHLISSAVLGFGGVYHAIRGPETLEEYSSFFGYDW
KDKNKMTTILGFHLIVLGIGALLLVAKAMFFGGLYDTWAP
GGGDVRVITNPTLDPRVIFGYLLKSPFGGEGWIVSVNNLE
DVVGGHIWIGLICIAGGIWHILTTPFGWARRAFIWSGEAY
LSYSLGALSMMGFIATCFVWFNNTVYPSEFYGPTGPEASQ
AQAMTFLIRDQKLGANVGSAQGPTGLGKYLMRSPTGEIIF
GGETMRFWDFRGPWLEPLRGPNGLDLNKIKNDIQPWQERR
AAEYMTHAPLGSLNSVGGVATEINSVNFVSPRSWLATSHF
VLAFFFLVGHLWHAGRARAAAAGFEKGIDRESEPVLSMPS
LD
Description


Functional site

1) chain C
residue 354
type
sequence E
description binding site for residue CL A 407
source : AC7

2) chain C
residue 214
type
sequence L
description binding site for residue LMG A 409
source : AC9

3) chain C
residue 215
type
sequence K
description binding site for residue LMG A 409
source : AC9

4) chain C
residue 216
type
sequence S
description binding site for residue LMG A 409
source : AC9

5) chain C
residue 221
type
sequence E
description binding site for residue LMG A 409
source : AC9

6) chain C
residue 281
type
sequence M
description binding site for residue LMG A 409
source : AC9

7) chain C
residue 34
type
sequence A
description binding site for residue SQD A 410
source : AD1

8) chain C
residue 36
type
sequence W
description binding site for residue SQD A 410
source : AD1

9) chain C
residue 253
type
sequence L
description binding site for residue STE B 624
source : AG1

10) chain C
residue 95
type
sequence L
description binding site for residue CLA C 501
source : AG3

11) chain C
residue 168
type
sequence L
description binding site for residue CLA C 501
source : AG3

12) chain C
residue 171
type
sequence G
description binding site for residue CLA C 501
source : AG3

13) chain C
residue 172
type
sequence A
description binding site for residue CLA C 501
source : AG3

14) chain C
residue 175
type
sequence L
description binding site for residue CLA C 501
source : AG3

15) chain C
residue 233
type
sequence V
description binding site for residue CLA C 501
source : AG3

16) chain C
residue 237
type
sequence H
description binding site for residue CLA C 501
source : AG3

17) chain C
residue 278
type
sequence A
description binding site for residue CLA C 501
source : AG3

18) chain C
residue 282
type
sequence M
description binding site for residue CLA C 501
source : AG3

19) chain C
residue 289
type
sequence F
description binding site for residue CLA C 501
source : AG3

20) chain C
residue 297
type
sequence Y
description binding site for residue CLA C 501
source : AG3

21) chain C
residue 91
type
sequence H
description binding site for residue CLA C 502
source : AG4

22) chain C
residue 95
type
sequence L
description binding site for residue CLA C 502
source : AG4

23) chain C
residue 182
type
sequence F
description binding site for residue CLA C 502
source : AG4

24) chain C
residue 279
type
sequence L
description binding site for residue CLA C 502
source : AG4

25) chain C
residue 282
type
sequence M
description binding site for residue CLA C 502
source : AG4

26) chain C
residue 286
type
sequence A
description binding site for residue CLA C 502
source : AG4

27) chain C
residue 297
type
sequence Y
description binding site for residue CLA C 502
source : AG4

28) chain C
residue 430
type
sequence H
description binding site for residue CLA C 502
source : AG4

29) chain C
residue 433
type
sequence L
description binding site for residue CLA C 502
source : AG4

30) chain C
residue 437
type
sequence F
description binding site for residue CLA C 502
source : AG4

31) chain C
residue 60
type
sequence I
description binding site for residue CLA C 503
source : AG5

32) chain C
residue 61
type
sequence V
description binding site for residue CLA C 503
source : AG5

33) chain C
residue 68
type
sequence T
description binding site for residue CLA C 503
source : AG5

34) chain C
residue 88
type
sequence L
description binding site for residue CLA C 503
source : AG5

35) chain C
residue 91
type
sequence H
description binding site for residue CLA C 503
source : AG5

36) chain C
residue 92
type
sequence I
description binding site for residue CLA C 503
source : AG5

37) chain C
residue 114
type
sequence V
description binding site for residue CLA C 503
source : AG5

38) chain C
residue 118
type
sequence H
description binding site for residue CLA C 503
source : AG5

39) chain C
residue 63
type
sequence W
description binding site for residue CLA C 504
source : AG6

40) chain C
residue 67
type
sequence M
description binding site for residue CLA C 504
source : AG6

41) chain C
residue 70
type
sequence F
description binding site for residue CLA C 504
source : AG6

42) chain C
residue 84
type
sequence Q
description binding site for residue CLA C 504
source : AG6

43) chain C
residue 85
type
sequence G
description binding site for residue CLA C 504
source : AG6

44) chain C
residue 425
type
sequence W
description binding site for residue CLA C 504
source : AG6

45) chain C
residue 429
type
sequence S
description binding site for residue CLA C 504
source : AG6

46) chain C
residue 264
type
sequence F
description binding site for residue CLA C 505
source : AG7

47) chain C
residue 273
type
sequence S
description binding site for residue CLA C 505
source : AG7

48) chain C
residue 274
type
sequence Y
description binding site for residue CLA C 505
source : AG7

49) chain C
residue 277
type
sequence G
description binding site for residue CLA C 505
source : AG7

50) chain C
residue 441
type
sequence H
description binding site for residue CLA C 505
source : AG7

51) chain C
residue 442
type
sequence L
description binding site for residue CLA C 505
source : AG7

52) chain C
residue 445
type
sequence A
description binding site for residue CLA C 505
source : AG7

53) chain C
residue 449
type
sequence R
description binding site for residue CLA C 505
source : AG7

54) chain C
residue 213
type
sequence L
description binding site for residue CLA C 506
source : AG8

55) chain C
residue 243
type
sequence I
description binding site for residue CLA C 506
source : AG8

56) chain C
residue 247
type
sequence G
description binding site for residue CLA C 506
source : AG8

57) chain C
residue 250
type
sequence W
description binding site for residue CLA C 506
source : AG8

58) chain C
residue 251
type
sequence H
description binding site for residue CLA C 506
source : AG8

59) chain C
residue 254
type
sequence T
description binding site for residue CLA C 506
source : AG8

60) chain C
residue 255
type
sequence T
description binding site for residue CLA C 506
source : AG8

61) chain C
residue 256
type
sequence P
description binding site for residue CLA C 506
source : AG8

62) chain C
residue 257
type
sequence F
description binding site for residue CLA C 506
source : AG8

63) chain C
residue 259
type
sequence W
description binding site for residue CLA C 506
source : AG8

64) chain C
residue 264
type
sequence F
description binding site for residue CLA C 506
source : AG8

65) chain C
residue 157
type
sequence M
description binding site for residue CLA C 507
source : AG9

66) chain C
residue 161
type
sequence L
description binding site for residue CLA C 507
source : AG9

67) chain C
residue 164
type
sequence H
description binding site for residue CLA C 507
source : AG9

68) chain C
residue 168
type
sequence L
description binding site for residue CLA C 507
source : AG9

69) chain C
residue 259
type
sequence W
description binding site for residue CLA C 507
source : AG9

70) chain C
residue 271
type
sequence Y
description binding site for residue CLA C 507
source : AG9

71) chain C
residue 274
type
sequence Y
description binding site for residue CLA C 507
source : AG9

72) chain C
residue 275
type
sequence S
description binding site for residue CLA C 507
source : AG9

73) chain C
residue 36
type
sequence W
description binding site for residue CLA C 508
source : AH1

74) chain C
residue 37
type
sequence A
description binding site for residue CLA C 508
source : AH1

75) chain C
residue 38
type
sequence G
description binding site for residue CLA C 508
source : AH1

76) chain C
residue 39
type
sequence N
description binding site for residue CLA C 508
source : AH1

77) chain C
residue 272
type
sequence L
description binding site for residue CLA C 508
source : AH1

78) chain C
residue 436
type
sequence F
description binding site for residue CLA C 508
source : AH1

79) chain C
residue 437
type
sequence F
description binding site for residue CLA C 508
source : AH1

80) chain C
residue 440
type
sequence G
description binding site for residue CLA C 508
source : AH1

81) chain C
residue 443
type
sequence W
description binding site for residue CLA C 508
source : AH1

82) chain C
residue 444
type
sequence H
description binding site for residue CLA C 508
source : AH1

83) chain C
residue 447
type
sequence R
description binding site for residue CLA C 508
source : AH1

84) chain C
residue 39
type
sequence N
description binding site for residue CLA C 509
source : AH2

85) chain C
residue 49
type
sequence L
description binding site for residue CLA C 509
source : AH2

86) chain C
residue 52
type
sequence A
description binding site for residue CLA C 509
source : AH2

87) chain C
residue 53
type
sequence H
description binding site for residue CLA C 509
source : AH2

88) chain C
residue 56
type
sequence H
description binding site for residue CLA C 509
source : AH2

89) chain C
residue 149
type
sequence Y
description binding site for residue CLA C 509
source : AH2

90) chain C
residue 151
type
sequence W
description binding site for residue CLA C 509
source : AH2

91) chain C
residue 268
type
sequence G
description binding site for residue CLA C 509
source : AH2

92) chain C
residue 272
type
sequence L
description binding site for residue CLA C 509
source : AH2

93) chain C
residue 275
type
sequence S
description binding site for residue CLA C 509
source : AH2

94) chain C
residue 39
type
sequence N
description binding site for residue CLA C 510
source : AH3

95) chain C
residue 56
type
sequence H
description binding site for residue CLA C 510
source : AH3

96) chain C
residue 279
type
sequence L
description binding site for residue CLA C 510
source : AH3

97) chain C
residue 436
type
sequence F
description binding site for residue CLA C 510
source : AH3

98) chain C
residue 437
type
sequence F
description binding site for residue CLA C 510
source : AH3

99) chain C
residue 35
type
sequence W
description binding site for residue CLA C 511
source : AH4

100) chain C
residue 38
type
sequence G
description binding site for residue CLA C 511
source : AH4

101) chain C
residue 39
type
sequence N
description binding site for residue CLA C 511
source : AH4

102) chain C
residue 41
type
sequence R
description binding site for residue CLA C 511
source : AH4

103) chain C
residue 42
type
sequence L
description binding site for residue CLA C 511
source : AH4

104) chain C
residue 48
type
sequence K
description binding site for residue CLA C 511
source : AH4

105) chain C
residue 126
type
sequence G
description binding site for residue CLA C 511
source : AH4

106) chain C
residue 127
type
sequence F
description binding site for residue CLA C 511
source : AH4

107) chain C
residue 134
type
sequence I
description binding site for residue CLA C 511
source : AH4

108) chain C
residue 53
type
sequence H
description binding site for residue CLA C 512
source : AH5

109) chain C
residue 146
type
sequence F
description binding site for residue CLA C 512
source : AH5

110) chain C
residue 147
type
sequence F
description binding site for residue CLA C 512
source : AH5

111) chain C
residue 163
type
sequence F
description binding site for residue CLA C 512
source : AH5

112) chain C
residue 164
type
sequence H
description binding site for residue CLA C 512
source : AH5

113) chain C
residue 167
type
sequence V
description binding site for residue CLA C 512
source : AH5

114) chain C
residue 171
type
sequence G
description binding site for residue CLA C 512
source : AH5

115) chain C
residue 50
type
sequence L
description binding site for residue CLA C 513
source : AH6

116) chain C
residue 54
type
sequence V
description binding site for residue CLA C 513
source : AH6

117) chain C
residue 124
type
sequence V
description binding site for residue CLA C 513
source : AH6

118) chain C
residue 128
type
sequence G
description binding site for residue CLA C 513
source : AH6

119) chain C
residue 131
type
sequence Y
description binding site for residue CLA C 513
source : AH6

120) chain C
residue 132
type
sequence H
description binding site for residue CLA C 513
source : AH6

121) chain C
residue 137
type
sequence P
description binding site for residue CLA C 513
source : AH6

122) chain C
residue 140
type
sequence L
description binding site for residue CLA C 513
source : AH6

123) chain C
residue 143
type
sequence Y
description binding site for residue CLA C 513
source : AH6

124) chain C
residue 209
type
sequence I
description binding site for residue BCR C 514
source : AH7

125) chain C
residue 213
type
sequence L
description binding site for residue BCR C 514
source : AH7

126) chain C
residue 233
type
sequence V
description binding site for residue BCR C 514
source : AH7

127) chain C
residue 236
type
sequence G
description binding site for residue BCR C 514
source : AH7

128) chain C
residue 237
type
sequence H
description binding site for residue BCR C 514
source : AH7

129) chain C
residue 240
type
sequence I
description binding site for residue BCR C 514
source : AH7

130) chain C
residue 264
type
sequence F
description binding site for residue BCR C 514
source : AH7

131) chain C
residue 58
type
sequence G
description binding site for residue BCR C 515
source : AH8

132) chain C
residue 59
type
sequence L
description binding site for residue BCR C 515
source : AH8

133) chain C
residue 119
type
sequence L
description binding site for residue BCR C 515
source : AH8

134) chain C
residue 122
type
sequence S
description binding site for residue BCR C 515
source : AH8

135) chain C
residue 123
type
sequence A
description binding site for residue BCR C 515
source : AH8

136) chain C
residue 126
type
sequence G
description binding site for residue BCR C 515
source : AH8

137) chain C
residue 217
type
sequence P
description binding site for residue DGD C 516
source : AH9

138) chain C
residue 219
type
sequence G
description binding site for residue DGD C 516
source : AH9

139) chain C
residue 220
type
sequence G
description binding site for residue DGD C 516
source : AH9

140) chain C
residue 222
type
sequence G
description binding site for residue DGD C 516
source : AH9

141) chain C
residue 223
type
sequence W
description binding site for residue DGD C 516
source : AH9

142) chain C
residue 227
type
sequence V
description binding site for residue DGD C 516
source : AH9

143) chain C
residue 288
type
sequence C
description binding site for residue DGD C 516
source : AH9

144) chain C
residue 292
type
sequence F
description binding site for residue DGD C 516
source : AH9

145) chain C
residue 293
type
sequence N
description binding site for residue DGD C 516
source : AH9

146) chain C
residue 294
type
sequence N
description binding site for residue DGD C 516
source : AH9

147) chain C
residue 295
type
sequence T
description binding site for residue DGD C 516
source : AH9

148) chain C
residue 360
type
sequence D
description binding site for residue DGD C 516
source : AH9

149) chain C
residue 361
type
sequence F
description binding site for residue DGD C 516
source : AH9

150) chain C
residue 362
type
sequence R
description binding site for residue DGD C 516
source : AH9

151) chain C
residue 83
type
sequence E
description binding site for residue DGD C 517
source : AI1

152) chain C
residue 84
type
sequence Q
description binding site for residue DGD C 517
source : AI1

153) chain C
residue 85
type
sequence G
description binding site for residue DGD C 517
source : AI1

154) chain C
residue 406
type
sequence S
description binding site for residue DGD C 517
source : AI1

155) chain C
residue 418
type
sequence N
description binding site for residue DGD C 517
source : AI1

156) chain C
residue 419
type
sequence F
description binding site for residue DGD C 517
source : AI1

157) chain C
residue 420
type
sequence V
description binding site for residue DGD C 517
source : AI1

158) chain C
residue 425
type
sequence W
description binding site for residue DGD C 517
source : AI1

159) chain C
residue 405
type
sequence N
description binding site for residue DGD C 518
source : AI2

160) chain C
residue 415
type
sequence N
description binding site for residue DGD C 518
source : AI2

161) chain C
residue 416
type
sequence S
description binding site for residue DGD C 518
source : AI2

162) chain C
residue 418
type
sequence N
description binding site for residue DGD C 518
source : AI2

163) chain C
residue 204
type
sequence L
description binding site for residue STE C 519
source : AI3

164) chain C
residue 114
type
sequence V
description binding site for residue STE C 520
source : AI4

165) chain C
residue 118
type
sequence H
description binding site for residue STE C 520
source : AI4

166) chain C
residue 121
type
sequence S
description binding site for residue STE C 520
source : AI4

167) chain C
residue 354
type
sequence E
description binding site for residue OEX C 522
source : AI6

168) chain C
residue 357
type
sequence R
description binding site for residue OEX C 522
source : AI6

169) chain C
residue 36
type
sequence W
description binding site for residue LHG D 411
source : AJ8

170) chain C
residue 436
type
sequence F
description binding site for residue LHG D 411
source : AJ8

171) chain C
residue 443
type
sequence W
description binding site for residue LHG D 411
source : AJ8

172) chain C
residue 447
type
sequence R
description binding site for residue LHG D 411
source : AJ8

173) chain C
residue 181
type
sequence F
description binding site for residue CLA H 101
source : AK3

174) chain C
residue 120
type
sequence I
description binding site for residue BCR K 101
source : AL1

175) chain C
residue 121
type
sequence S
description binding site for residue BCR K 101
source : AL1

176) chain C
residue 62
type
sequence F
description binding site for residue BCR K 102
source : AL2

177) chain C
residue 74
type
sequence H
description binding site for residue LMG Y 101
source : AM5

178) chain C
residue 433
type
sequence L
description binding site for residue LMG Y 101
source : AM5

179) chain C
residue 127
type
sequence F
description binding site for residue STE Z 101
source : AM6


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