eF-site ID 6v3e-bcdefghijklmnopqrst PDB Code 6v3e Chain b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, q, r, s, t click to enlarge Title Cryo-EM structure of the Acinetobacter baumannii Ribosome: 30S subunit Classification RIBOSOME Compound 16s Ribosomal RNA Source ORGANISM_SCIENTIFIC: Acinetobacter baumannii; Sequence b:  YNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHII NLEHTVPALNDALNFANQLASKKNKVLFVGTKRAASNIIR EQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQS QDGTFAKLTKREALERTREMEKLERSLGGVKNMGGLPDAL FVIDVDHEAIAIKEAKNLGIPVIGIVDTNSNPDNVDYVIP GNDDAIRAVTLYASAMADAILAGKE c:  GQKVHPIGIRLGVVKRHNANWYANPKQYAEYLLKDLQVRE FLTKKLKNAMVSNILIERPSGAAKVTISTARPGIVIGKKG EDIEKLQRELTNIMGVPAQVSINEIDRPDLDARLVAEAIA SQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAE IARTEWYREGRVPLHTLRADIDYATMRAETTYGTIGVKVW IFRGEILGGMKQVMN d:  ARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKANKAPGQ HGQARGGKQSEYSLQLREKQKVRRIYGVLERQFSNYYKEA ARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQLVS HRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAI ELAAQRGIPAWIEVDHSKLEGTFKAAPDRSDLPAEINESL IVELYSK e:  LVEKLVAVDRVAKVVKGGRIFSFTALTVVGDGNGRVGFGR GKAREVPAAISKALEAARRNMITVDLAGTTLQHPVNARHG ASRVYMQPASEGTGVIAGGAMRAVLEAAGVHNVLAKCYGS TNAANVVNATFKGLRDMTSPEKVAAKRGKSVEEIQ f:  MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLE DWGRRQLAYPINKIHKAHYILMNVECGQSTLDELEELFRY NDAIIRNLIIRREH g:  REILPDPKFSSQTIAKFMNHVMQDGKKSIAESIVYGALER VQEKNKVDPVEFFETTLEKVRPMVEVKARRVGGATYQVPM EVRPSRRTALAMRWLVDAAAKRSEKTMALRLAGELLDAAE GKGAAIKKREDVH h:  SMQDTVADMLTRVRNAQMAKKQTVSMPSSKLKVAIANVLQ QEGYISNVEVAQEETKSTLTITLKYFEGKPVIEMVKRVSR PGLRQYRGKDKLPSVKQGLGIAIVSTSKGIMTDRAARAAG IGGEVIAFVS i:  ATNYGTGRRKTATARVFLSAGTGKLVINNRTLEQYFGRET ARMVVRQPLELLEATEKYDLYITVKGGGIGGQAGAIRHGI TRALIAADETLKPVLRQAGFVTRDAREVERKKLGLRKARK RPQFSKR j:  NQRIRIRLKSFDHRLIDQSAQEIVETAKRTGAQVCGPIPM PTRIERFNVLTSPHVNKDARDQYEIRTYKRLIDIVQPTDK TVDALMKLDLAAGVDVQIAL k:  TRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGF RGSRKSTPFAAQVAAEVAGKAALDYGLKNLDVLVKGPGPG RESAVRALGAVGYKINSITDVTPIPHNGCRPPKKRRV l:  ATTNQLIRKGRTTLVEKSKVPALKACPQRRGVCTRVYTTT PKKPNSAMRKVCRVRLTSGFEVSSYIGGEGHNLQEHSVVL IRGGRVKDLPGVRYHTVRGSLDCAGVKDRNQSRSKYGAKR PK m:  ARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAVGITE TTKIRELDDAQLDAIRAEVAKVPTEGDLRREISMNIKRLM DLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI n:  AKKGMINRELKREKTVAKYAAKRAELKATIANVNASDEER FEAMLKLQALPRNASPVRLRNRCGLTGRPHGYFRKFGLSR NKLRDTVMQGDVPGVVKASW o:  ALTNADRAEIIAKFARAENDTGSPEVQVALLTAQINDLQG HFKAHKHDHHSRRGLIRMVNQRRKLLDYLNGKDHERYTAL IGALGLRR p:  MVVIRLARGGAKKRPFYQIVVTDSRNARDGRFIERIGFFN PTAQGQAEKLRLDADRFAHWVSQGAQPSERVASLAAQAKK ATA q:  KTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRST KLHAHDENNVAKIGDVVTIKESRPISKTKAWTLVEVVEAA r:  YIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAI KQARYLSLIPYTD s:  PRSLKKGPFVDAHLFAKVEAAVASNSRKPIKTWSRRSMIL PDFVGLTISVHNGRNHVPVIVTEHMVGHKLGEFAPTRTYR GH t:  NSAQAKKRARQNVKARKHNASLRSMVRTYIKRTLSAIAGG DYAVATEAYKKAVPVIDRMADKGIIHKNKAARHKSRLNAQ VKALA Description (1)  30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20/RNA Complex Functional site 1) chain l residue 89 type MOD_RES sequence D description 3-methylthioaspartic acid => ECO:0000250 source Swiss-Prot : SWS_FT_FI1 2) chain l residue 43-50 type prosite sequence KKPNSAMR description RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAmR source prosite : PS00055 3) chain d residue 96-120 type prosite sequence LESRLDNVVYRMGFGSTRAEARQLV description RIBOSOMAL_S4 Ribosomal protein S4 signature. LEsRLdnvVYRmgfGsTraeARqLV source prosite : PS00632 4) chain n residue 63-85 type prosite sequence RCGLTGRPHGYFRKFGLSRNKLR description RIBOSOMAL_S14 Ribosomal protein S14 signature. R.CgltgrphgyfrkFGLSRnKLR source prosite : PS00527 5) chain r residue 21-44 type prosite sequence IDYKDIDTLKQYITENGKIVPSRI description RIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.IdtLkqYITEn.GKIvpsRI source prosite : PS00057 6) chain o residue 39-69 type prosite sequence LQGHFKAHKHDHHSRRGLIRMVNQRRKLLDY description RIBOSOMAL_S15 Ribosomal protein S15 signature. LqgHFkahKhDhhSrrgLirMvnqrrkLldY source prosite : PS00362 7) chain f residue 43-52 type prosite sequence GRRQLAYPIN description RIBOSOMAL_S6 Ribosomal protein S6 signature. GrRQLAYpIN source prosite : PS01048 8) chain s residue 53-77 type prosite sequence NGRNHVPVIVTEHMVGHKLGEFAPT description RIBOSOMAL_S19 Ribosomal protein S19 signature. NGRnhvpviVtehmVGhkLGEFapT source prosite : PS00323 9) chain j residue 29-44 type prosite sequence AKRTGAQVCGPIPMPT description RIBOSOMAL_S10 Ribosomal protein S10 signature. AkrtGAqvcGPIpMPT source prosite : PS00361 10) chain b residue 8-19 type prosite sequence MRDLLQAGAHFG description RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MrDLLQAGAHFG source prosite : PS00962 11) chain b residue 160-184 type prosite sequence PDALFVIDVDHEAIAIKEAKNLGIP description RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PdaLFViDvdhEaiaIkEaknlGIP source prosite : PS00963 12) chain q residue 57-69 type prosite sequence GDVVTIKESRPIS description RIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVtIkEsRPIS source prosite : PS00056 13) chain p residue 20-29 type prosite sequence VVIRLARGGA description RIBOSOMAL_S16 Ribosomal protein S16 signature. VvIRLARGGA source prosite : PS00732 14) chain i residue 67-85 type prosite sequence GGGIGGQAGAIRHGITRAL description RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGigGQagAirhGiTRAL source prosite : PS00360 15) chain h residue 101-118 type prosite sequence GIAIVSTSKGIMTDRAAR description RIBOSOMAL_S8 Ribosomal protein S8 signature. GiaIVSTSkGIMtdraAR source prosite : PS00053 16) chain m residue 87-100 type prosite sequence RGLRHRRSLPVRGQ description RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrSlpVRGQ source prosite : PS00646 17) chain k residue 96-118 type prosite sequence VRALGAVGYKINSITDVTPIPHN description RIBOSOMAL_S11 Ribosomal protein S11 signature. VrALgaV.GYkInsitDvTPiPHN source prosite : PS00054 18) chain g residue 20-46 type prosite sequence SQTIAKFMNHVMQDGKKSIAESIVYGA description RIBOSOMAL_S7 Ribosomal protein S7 signature. SqTiakFMnhvmqdGKKsiaesIVygA source prosite : PS00052 19) chain e residue 27-59 type prosite sequence GRIFSFTALTVVGDGNGRVGFGRGKAREVPAAI description RIBOSOMAL_S5 Ribosomal protein S5 signature. GRifsFtAltVVGDgn.GrVGfGrgkar.EVpa.AI source prosite : PS00585 20) chain c residue 163-197 type prosite sequence ARTEWYREGRVPLHTLRADIDYATMRAETTYGTIG description RIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewyreGrVplHt..LradIDyatmraeTtyGtiG source prosite : PS00548

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