eF-site ID 6utn-AB
PDB Code 6utn
Chain A, B

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Title Native E. coli Glyceraldehyde 3-phosphate dehydrogenase
Classification CYTOSOLIC PROTEIN
Compound Glyceraldehyde-3-phosphate dehydrogenase
Source (A0A0U4BD45_ECOLX)
Sequence A:  TIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYX
AYXLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPA
NLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVXTG
PSKDNTPXFVKGANFDKYAGQDIVSNASXTTNCLAPLAKV
INDNFGIIEGLXTTVHATTATQKTVDGPSHKDWRGGRGAS
QNIIPSSTGAAKAVGKVLPELNGKLTGXAFRVPTPNVSVV
DLTVRLEKAATYEQIKAAVKAAAEGEXKGVLGYTEDDVVS
TDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNK
VLDLIAHISK
B:  TIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYX
AYXLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPA
NLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVXTG
PSKDNTPXFVKGANFDKYAGQDIVSNASXTTNCLAPLAKV
INDNFGIIEGLXTTVHATTATQKTVDGPSHKDWRGGRGAS
QNIIPSSTGAAKAVGKVLPELNGKLTGXAFRVPTPNVSVV
DLTVRLEKAATYEQIKAAVKAAAEGEXKGVLGYTEDDVVS
TDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNK
VLDLIAHISK
Description (1)  Glyceraldehyde-3-phosphate dehydrogenase (E.C.1.2.1.-)


Functional site

1) chain A
residue 114
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI10

2) chain B
residue 123
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI10

3) chain B
residue 212
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI10

4) chain B
residue 216
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI10

5) chain B
residue 224
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI10

6) chain B
residue 248
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI10

7) chain B
residue 256
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI10

8) chain B
residue 260
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI10

9) chain A
residue 123
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI10

10) chain A
residue 212
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI10

11) chain A
residue 216
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI10

12) chain A
residue 224
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI10

13) chain A
residue 248
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI10

14) chain A
residue 256
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI10

15) chain A
residue 260
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI10

16) chain B
residue 114
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI10

17) chain A
residue 131
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI11

18) chain A
residue 191
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI11

19) chain A
residue 330
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI11

20) chain B
residue 131
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI11

21) chain B
residue 191
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI11

22) chain B
residue 330
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000269|PubMed:21151122
source Swiss-Prot : SWS_FT_FI11

23) chain A
residue 77
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:10978154, ECO:0000269|PubMed:19542219
source Swiss-Prot : SWS_FT_FI4

24) chain B
residue 77
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:10978154, ECO:0000269|PubMed:19542219
source Swiss-Prot : SWS_FT_FI4

25) chain A
residue 119
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:19542219
source Swiss-Prot : SWS_FT_FI5

26) chain B
residue 119
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:19542219
source Swiss-Prot : SWS_FT_FI5

27) chain A
residue 148
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:10978154
source Swiss-Prot : SWS_FT_FI6

28) chain A
residue 208
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:10978154
source Swiss-Prot : SWS_FT_FI6

29) chain B
residue 148
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:10978154
source Swiss-Prot : SWS_FT_FI6

30) chain B
residue 208
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:10978154
source Swiss-Prot : SWS_FT_FI6

31) chain A
residue 179
type BINDING
sequence T
description BINDING => ECO:0000250|UniProtKB:P00362
source Swiss-Prot : SWS_FT_FI7

32) chain B
residue 179
type BINDING
sequence T
description BINDING => ECO:0000250|UniProtKB:P00362
source Swiss-Prot : SWS_FT_FI7

33) chain A
residue 231
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:19542219, ECO:0000269|Ref.18, ECO:0000305|PubMed:10978154
source Swiss-Prot : SWS_FT_FI8

34) chain B
residue 231
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:19542219, ECO:0000269|Ref.18, ECO:0000305|PubMed:10978154
source Swiss-Prot : SWS_FT_FI8

35) chain A
residue 176
type SITE
sequence H
description Activates thiol group during catalysis => ECO:0000269|PubMed:2659073
source Swiss-Prot : SWS_FT_FI9

36) chain B
residue 176
type SITE
sequence H
description Activates thiol group during catalysis => ECO:0000269|PubMed:2659073
source Swiss-Prot : SWS_FT_FI9

37) chain A
residue 149
type ACT_SITE
sequence X
description Nucleophile => ECO:0000305|PubMed:10978154
source Swiss-Prot : SWS_FT_FI1

38) chain B
residue 149
type ACT_SITE
sequence X
description Nucleophile => ECO:0000305|PubMed:10978154
source Swiss-Prot : SWS_FT_FI1

39) chain A
residue 33
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:10978154, ECO:0000269|PubMed:19542219, ECO:0000269|PubMed:8636984
source Swiss-Prot : SWS_FT_FI3

40) chain A
residue 313
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:10978154, ECO:0000269|PubMed:19542219, ECO:0000269|PubMed:8636984
source Swiss-Prot : SWS_FT_FI3

41) chain B
residue 33
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:10978154, ECO:0000269|PubMed:19542219, ECO:0000269|PubMed:8636984
source Swiss-Prot : SWS_FT_FI3

42) chain B
residue 313
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:10978154, ECO:0000269|PubMed:19542219, ECO:0000269|PubMed:8636984
source Swiss-Prot : SWS_FT_FI3

43) chain A
residue 11
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:10978154, ECO:0000269|PubMed:19542219, ECO:0000269|PubMed:8636984, ECO:0000269|Ref.18
source Swiss-Prot : SWS_FT_FI2

44) chain B
residue 11
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:10978154, ECO:0000269|PubMed:19542219, ECO:0000269|PubMed:8636984, ECO:0000269|Ref.18
source Swiss-Prot : SWS_FT_FI2

45) chain A
residue 147-154
type prosite
sequence ASXTTNCL
description GAPDH Glyceraldehyde 3-phosphate dehydrogenase active site. ASCTTNcL
source prosite : PS00071

46) chain A
residue 137
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:18723842
source Swiss-Prot : SWS_FT_FI12

47) chain B
residue 137
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:18723842
source Swiss-Prot : SWS_FT_FI12


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