eF-site ID 6ssk-ABCDEFGHI
PDB Code 6ssk
Chain A, B, C, D, E, F, G, H, I

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Title Human endogenous retrovirus (HML2) mature capsid assembly, D5 capsule
Classification VIRAL PROTEIN
Compound Endogenous retrovirus group K member 24 Gag polyprotein
Source (GAK24_HUMAN)
Sequence A:  PVTLEPVEARYKSFSIKMLKDMKEGVKQYGPNSPYMRTLL
DSIAHGHRLIPYDWEILAKSSLSPSQFLQFKTWWIDGVQE
QVRRNRAANPPVNIDADQLLGIGQNWSTISQQALMQNEAI
EQVRAICLRAWEKIQDPGSACPSFNTVRQGSKEPYPDFVA
RLQDVAQKSIADEKARKVIVELMAYENANPECQSAIKPLK
GKVPAGSDVISEYVKACDGIG
B:  PVTLEPMTVEARYKSFSIKMLKDMKEGVKQYGPNSPYMRT
LLDSIAHGHRLIPYDWEILAKSSLSPSQFLQFKTWWIDGV
QEQVRRNRAANPPVNIDADQLLGIGQNWSTISQQALMQNE
AIEQVRAICLRAWEKIQDPGSACPSFNTVRQGSKEPYPDF
VARLQDVAQKSIADEKARKVIVELMAYENANPECQSAIKP
LKGKVPAGSDVISEYVKACDGIG
C:  PVTLEPTVEARYKSFSIKMLKDMKEGVKQYGPNSPYMRTL
LDSIAHGHRLIPYDWEILAKSSLSPSQFLQFKTWWIDGVQ
EQVRRNRAANPPVNIDADQLLGIGQNWSTISQQALMQNEA
IEQVRAICLRAWEKIQPSFNTVRQGSKEPYPDFVARLQDV
AQKSIADEKARKVIVELMAYENANPECQSAIKPLKGKVPA
GSDVISEYVKACDGIG
D:  PVTLEPVEARYKSFSIKMLKDMKEGVKQYGPNSPYMRTLL
DSIAHGHRLIPYDWEILAKSSLSPSQFLQFKTWWIDGVQE
QVRRNRAANPPVNIDADQLLGIGQNWSTISQQALMQNEAI
EQVRAICLRAWEKIQDPGSACPSFNTVRQGSKEPYPDFVA
RLQDVAQKSIADEKARKVIVELMAYENANPECQSAIKPLK
GKVPAGSDVISEYVKACDGIGG
E:  PVTLEPVEARYKSFSIKMLKDMKEGVKQYGPNSPYMRTLL
DSIAHGHRLIPYDWEILAKSSLSPSQFLQFKTWWIDGVQE
QVRRNRAANPPVNIDADQLLGIGQNWSTISQQALMQNEAI
EQVRAICLRAWEKIQDPGSACPSFNTVRQGSKEPYPDFVA
RLQDVAQKSIADEKARKVIVELMAYENANPECQSAIKPLK
GKVPAGSDVISEYVKACDGIGG
F:  PVTLEVEARYKSFSIKMLKDMKEGVKQYGPNSPYMRTLLD
SIAHGHRLIPYDWEILAKSSLSPSQFLQFKTWWIDGVQEQ
VRRNRAANPPVNIDADQLLGIGQNWSTISQQALMQNEAIE
QVRAICLRAWEKIQDPGSACPSFNTVRQGSKEPYPDFVAR
LQDVAQKSIADEKARKVIVELMAYENANPECQSAIKPLKG
KVPAGSDVISEYVKACDGIGG
G:  PVTLEPVEARYKSFSIKMLKDMKEGVKQYGPNSPYMRTLL
DSIAHGHRLIPYDWEILAKSSLSPSQFLQFKTWWIDGVQE
QVRRNRAANPPVNIDADQLLGIGQNWSTISQQALMQNEAI
EQVRAICLRAWEKIQDPGSACPSFNTVRQGSKEPYPDFVA
RLQDVAQKSIADEKARKVIVELMAYENANPECQSAIKPLK
GKVPAGSDVISEYVKACDGIGG
H:  PVTLVEARYKSFSIKMLKDMKEGVKQYGPNSPYMRTLLDS
IAHGHRLIPYDWEILAKSSLSPSQFLQFKTWWIDGVQEQV
RRNRAANPPVNIDADQLLGIGQNWSTISQQALMQNEAIEQ
VRAICLRAWEKIQDPGSACPSFNTVRQGSKEPYPDFVARL
QDVAQKSIADEKARKVIVELMAYENANPECQSAIKPLKGK
VPAGSDVISEYVKACDGIGG
I:  PVTLEEARYKSFSIKMLKDMKEGVKQYGPNSPYMRTLLDS
IAHGHRLIPYDWEILAKSSLSPSQFLQFKTWWIDGVQEQV
RRNRAANPPVNIDADQLLGIGQNWSTISQQALMQNEAIEQ
VRAICLRAWEKIQDPGSACPSFNTVRQGSKEPYPDFVARL
QDVAQKSIADEKARKVIVELMAYENANPECQSAIKPLKGK
VPAGSDVISEYVKACDGIGG
Description (1)  Endogenous retrovirus group K member 24 Gag polyprotein

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