Title
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Pseudomonas aeruginosa 70s ribosome from a clinical isolate |
Classification
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RIBOSOME |
Compound
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16S ribosomal RNA |
Source
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ORGANISM_SCIENTIFIC: Pseudomonas aeruginosa; |
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Sequence
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1: |
KADIHPTYEAIEATCSCGNVIKTRSTLCKPI
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2: |
AVQQNKKSRSARDMRRSHDALESNALSVEKSTGEVHLRHH
VSPDGFYRGRKVV
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3: |
RELIRLVSSAGTGHFYTTDKNKRTKPEKIEIKKYDPVVRQ
HVIYKEAKIK
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4: |
MKRTFQPSTLKRARVHGFRARMATKNGRQVLSRRRAKGRK
RLTV
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5: |
PKMKTKSGAAKRFKKTAGGLKHKHAFKSHILTKMTTKRKR
QLRGTSMLNKSDVARVERSLRLR
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6: |
MKVRASVKKLCRNCKIIRRDGIVRVICSAEPRHKQRQG
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C: |
IVKCKPTSAGRRFVVKVVNQELHKGAPYAPLLEKKSKSGG
RNNNGRITTRHIGGGHKQHYRLVDFRRNKDGIPAIVERVE
YDPNRTAHIALLKYADGERRYIIAPKGVAAGDQLISGIGA
PIKAGNSMPLRNIPVGSTVHGIELKPGKGAQIARSAGASA
QLVAREGAYVTLRLRSGEMRKVLAECRATLGEVSNSEHSL
RSLGKAGATRWRGVRPTVRGVAMNPVDHPHGGGEGRTSAG
RHPVSPWGLQTKGKKTRSNKRTDNMIVRRRK
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D: |
IGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEE
TDGYRAVQVTAGERRASRVTKAQAGHFAKANVAAGRGVWE
FRLGEEQYAAGDQITVDLFQAGQMVDVTGESKGKGFAGTI
KRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMS
GHLGAERVTVQSLEIVRVDAERNLLLVKGAVPGATGGDVI
VRPAAKA
|
E: |
QLNVNGAQAIEVSERTFGGEFNETLVHQAVVAYMAGGRQG
SKAQKTRSEVSGGGKKPWRQKGTGRARAGTIRSPIWRGGG
TTFAAKPRSHEQKLNKKMYRAALRSILAELVRLDRLVVVA
DFAVDAPKTKGLVAKLDTLGLKDVLIVTDGVDENLYLAAR
NLAHVDVRDVQGSDPVSLIAYDKVLVTVSAVKKFEELLG
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F: |
RLKELYRKEIAPKLKEELQLANVMEVPRVTKITLNMGLGE
AVGDKKIIENAVADLEKITGQKPVVTYARKSIAGFKIREG
WPIGVKVTLRSDRMYEFLDRLLSISLPRVRDFRGLNAKSF
DGRGNYSMGVKEQIIFPEIDYDKIDALRGLDITLTTTART
DDEGRALLRAFKFP
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G: |
SRVAKNPVKLPAGVEIKLAGQQLSIKGAKGALELKVHPSV
EVIQDSGELRFAARNGDQQTRAMAGTTRALVNNMVVGVSQ
GFERKLQLVGVGYKAQAKGQVLSLSLGFSHPVDYELPAGI
VAETPSQTDILIKGIDKQLVGQVAAEIRDFRPPEPYKGKG
VRYADEVVRRKEA
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H: |
EVILLEKVANLGNLGDKVNIKGGYARNFLLPQGKATVATA
ENVAAFEARRAELEKAAAEKKAAAEARAAQLSELVVTL
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I: |
KKIQAYIKLQVKAGQANPSPPVGPALGQHGVNIMEFCKAF
NAKTQGQEPGLPTPVIITVYSDRSFTFETKSTPAAVLLKK
AAGITSGSARPNSQKVGTVTRAQLEEIAKTKQADLTAADL
DAAVRTIAGSARSMGLNVEG
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J: |
KTYTAKPETVQRDWFVVDAAGQTLGRLATEIARRLRGKHK
PEYTPHVDTGDYIVVINAEQVRVTGAKTTDKMYYHHSGFP
GGIKSINFEKLIAKAPERVIETAVKGMLPKNPLGRDMYRK
LKVYKGASHPHTAQQPQELKI
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K: |
MIQTQSMLDVADNSGARRVMCIKVLGGSHRRYAGIGDIIK
VTVKEAIPRGKVKKGQVMTAVVVRTKHGVRRTDGSIIRFD
GNAAVLLNNKQEPIGTRIFGPVTRELRTEKFMKIVSLAPE
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L: |
QLNDLRSAPGARREKHRPGRGIGSGLGKTGGRGHKGLTSR
SGGKVAPGFEGGQQPLHRRLPKFGFVSLKAMDRAEVRTSE
LAKVEGDVVSLQTLKDANLINQHVQRVKVMLSGEVGRAVT
LKGIAATKGARAAIEAAGGKFED
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M: |
MLQPKRTKFRKQMTGHNRGLAHRGSKVSFGEYALKATSRG
RLTARQIESARRALTRHVKRGGKIWIRVFPDKPVTKKPLE
VRMGKGKGGVEYWVAQIQPGKVLYEIEGVSEELAREAFAL
AAAKLPLATSFVKRT
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N: |
MRHRKSGRHLSRTSAHRKAMFQNMAVSLFEHELIKTTLPK
AKELRRVAEPLITLAKEDSVANRRLAFDRTRSKAAVGKLF
NDLGKRYANRPGGYLRILKCGFRAGDNAPMAYVELVDR
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O: |
SVKKETRLRRARKARLKMRELETVRLCVYRSSQHIYAQVI
AADGGKVLASASTLDKDLREGATGNIDAAKKVGQLVAERA
KAAGVTQVAFDRSGFKYHGRVKALADAAREGGLEF
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P: |
KIIQQIEAEQMNKEIPAFAPGDTVIVQVKVKEGDRQRLQA
FEGVVIAKRNRGLNSAFTVRKISNGVGVERTFQTYSPIVD
SLSVKRRGDVRKAKLYYLRALSGKAARIKEKLV
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Q: |
ARVKRGVIARRRHKKILKLAKGYYGARSRVFRVAKQAVIK
AGQYAYRDRRQRKRQFRALWIARINAGARQNGLSYSRLIA
GLKKAAIEIDRKVLADLAVNEKAAFTAIVEKAKASLA
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R: |
MYAVIVTGGKQHKVTEGEFLKVEKLDVATGEAIDFDRVLL
VANGEDVKIGLPVVEGAKVTAEVVSHGRHDKVRIIKFRRR
KHHMKRQGHRQWFTEIKITGIQ
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S: |
EVAAKLSGARISAQKARLVADQIRGKKVGEALNLLAFSSK
KAAEIMKKVLESAVANAEHNEGADVDDLKVSTVFVNEGRS
LKRIMPRAKGRADRIVKRSCHITVKVADK
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T: |
NQERVFKVLLGPHISEKATGLADGKSQFVFKVATDATKLE
IKKAVESLFSVKVQRVTTLNVKGKTKRTARGLGKRNDWKK
AYIALQPGQDLD
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U: |
MQKIRRDDEVIVIAGKDKGKRGKVLKVLADDRLVVGGVNL
IKRHTKPNPMLGQQGGIVEKEAPLHVSNVAIFNTETSKAD
RVGFKVEDGKKIRVFKSTQKPVQ
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V: |
FIVNAQVRSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSV
TLELREIAKLLENEAAFSHVIALNVGGVKETVLIKALQRH
PAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGVKQA
GGEISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLS
DLKAPKGVELVQLAHGNDLAVANIHASR
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W: |
TRNGRDSESKRLGVKLFGGQAVKAGNILVRLRGTKFHAGY
GVGLGKDHTLFAKVDGVVKFETKGAFGRKYVSIVAA
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X: |
SRVCQVTGKGPVTGNNISHAHNKTRRRFLPNLQHHRFWVE
SEKRFVRLRVSAKGMRIIDKRGIEAVLADLRARGEKF
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Y: |
KANELREEKSGPVTGNNISHLLRDQFNLRMQKATGQLGQS
HLLSQVKRDIARVKTVLNQQ
|
Z: |
ATVKVTLVKSLNGRLANHKACVKGLGLRRINHTVEVQDTP
ENRGMINKAYYLLRVEG
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b: |
QVNMRDMLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIIN
LEKTLPMFNEALTFVERLAAGKNKILFVGTKRSAGKIVRE
EAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQSQ
DGTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVD
HERIAITEANKLGIPVIGVVDTNSSPEGVDYVIPGNDDAI
RAVQLYLNSMAEAVIRGKQGAATSADEFVEEAPA
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c: |
QKVHPNGIRLGIVKEHTSVWYADRKNYADYLFADLKVREY
LQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKGE
DVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSVAQ
QLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEI
ARTEWYREGRVPLHTLRADIDYATYEAHTTYGVIGVKVWI
FKGEV
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d: |
ARYIGPKCKLSRREGTDLFLKSGARALDSKCKAENVPGQH
GQRRGRLSDYGLQLREKQKVRRIYGVLERQFRGYYQEASR
RKGSTGENLLQLLECRLDNVVYRMGFGSTRSESRQLVSHK
AITVNGQTVNIPSYQVKAGDVVAVREKSKNQLRIAQALEL
CGQRGRVEWVEVDLDKKAGTFKSAPARSDLSADINENLIV
ELYSK
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e: |
GYIEKLVQVNRVAKTVKGGRIFAFTALTVVGDGKGRVGFG
RGKAREVPAAIQKAMEAARRNMIQVDLNGTTLQYPTKSAH
GASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYG
STNPVNVVYATFKGLKNMQAPEAVAAKRGKSVEEIL
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f: |
RHYEIVFLVHPDQSEQVGGMVERYTKAIEEDGGKIHRLED
WGRRQLAYAINNVHKAHYVLMNVECSAKALAELEDNFRYN
DAVIRNLVMRRDEAVTEQSEMLKAE
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g: |
RRRVAAKREVLADPKYGSQILAKFMNHVMESGKKAVAERI
VYGALDKVKERGKADPLETFEKALDAIAPLVEVKSRRVGG
ATYQVPVEVRPSRRNALAMRWLVDFARKRGEKSMALRLAG
ELLDAAEGKGAAVKKREDVHRMAEANKAFSHYRF
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h: |
SMQDPLADMLTRIRNAQMAEKTVVSMPSSKLKAAVAKVLK
DEGYIADFQISSEVKPQLSIELKYFEGKPVIEEVKRISRP
GLRQYKSVEQLPKVRGGLGVSIVSTNKGVMTDRAARAAGV
GGEVLCTVF
|
i: |
ATQNYGTGRRKTATARVFLRPGTGKISINNRGLDQFFGRE
TARMVVRQPLELTETVEKFDIFVTVVGGGVSGQAGAIRHG
ITRALIEYDETLRSSLRKAGYVTRDAREVERKKVGLRKAR
KRPQYS
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j: |
IRLKAFDHRLIDQSTQEIVETAKRTGAQVRGPIPLPTRKE
RFTVLISPHVNKDARDQYEIRTHKRVLDIVQPTDKTVDAL
MKLDLAAGVEVQISLG
|
k: |
KTVVDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFR
GSRKSTPFAAQVAAERAGQAALEYGLKNLDVNVKGPGPGR
ESAVRALNACGYKIASITDVTPIPHNGCRPPKKRR
|
l: |
ATINQLVRKPRKRMVDKSDVPALQNCPQRRGVCTRVYTTT
PKKPNSALRKVCRVRLTNGFEVSSYIGGEGHNLQEHSVVL
IRGGRVKDLPGVRYHTVRGSLDTSGVKDRKQGRSKYGAKR
P
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m: |
RIAGVNIPDNKHTVISLTYIYGVGRTTAQSICAATGVNPA
AKIKDLSDEQIDQLRNEVAKITTEGDLRREINMNIKRLMD
LGCYRGLRHRRGLPVRGQRTKTNARTRKGP
|
n: |
KESMKNRELKRQLTVAKYAKKRAELKAIIANPNSSAEERW
NAQVALQKQPRDASASRLRNRCRLTGRPHGFYRKFGLSRN
KLREAAMRGDVPGLVKAS
|
o: |
LSVEEKAQIVNEYKQAEGDTGSPEVQVALLSANINKLQDH
FKANGKDHHSRRGLIRMVNQRRKLLDYLKGKDVSRYTALI
GRLGLR
|
p: |
MVTIRLARGGSKKRPFYHLTVTNSRNARDGRFVERIGFFN
PVATGGEVRLSVDQERATYWLGQGAQPSERVAQLLKDA
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q: |
RTLTGRVVSDKMDKTVTVLIERRVKHPIYGKYVKRSTKLH
AHDESNQCRIGDLVTIRETRPLAKTKAWTLVDIVER
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r: |
FFRRRRFCRFTAEGVKEIDYKDLNTLKAYVSETGKIVPSR
ITGTKAKYQRQLATAIKRARYLALLPYTDSH
|
s: |
PRSLKKGPFIDLHLLKKVEVAVEKNDRKPIKTWSRRSMIL
PHMVGLTIAVHNGRQHVPVLVNEDMVGHKLGEFAATRTYR
|
t: |
NTPSAKKRAKQAEKRRSHNASLRSMVRTYIKNVVKAIDAK
DLEKAQAAFTAAVPVIDRMADKGIIHKNKAARHKSRLSGH
IKALS
|
u: |
KVKEEPFDVALRRFKRSCEKAGALAEVRSREFYEKPTAER
KRKAAAAVKRHAKKVQREQRRR
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Description
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(1) |
30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein S21, 50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, 50S ribosomal protein L5, 50S ribosomal protein L6, 50S ribosomal protein L9, 50S ribosomal protein L11, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L16, 50S ribosomal protein L17, 50S ribosomal protein L18, 50S ribosomal protein L19, 50S ribosomal protein L20, 50S ribosomal protein L21, 50S ribosomal protein L22, 50S ribosomal protein L23, 50S ribosomal protein L24, 50S ribosomal protein L25, 50S ribosomal protein L27, 50S ribosomal protein L28, Ribosomal protein uL29, 50S ribosomal protein L30, 50S ribosomal protein L31, 50S ribosomal protein L32, 50S ribosomal protein L33, 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L36/RNA Complex
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