Title
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Pseudomonas aeruginosa 30s ribosome from a clinical isolate |
Classification
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RIBOSOME |
Compound
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16S ribosomal RNA |
Source
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ORGANISM_SCIENTIFIC: Pseudomonas aeruginosa; |
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Sequence
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a: |
AACUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCG
GCAGGCCUAACACAUGCAAGUCGAGCGGAUAAAGGGAGCU
UGCUCCUGGAUUCAGCGGCGGACGGGUGAGUAAUGCCUAG
GAAUCUGCCUGGUAGUGGGGGAUAACGUCCGGAAACGGGC
GCUAAUACCGCAUACGUCCUGAGGGAGAAAGUGGGGGAUC
UUCGGACCUCACGCUAUCAGAUGAGCCUAGGUCGGAUUAG
CUAGUUGGUGGGGUAAAGGCCUACCAAGGCGACGAUCCGU
AACUGGUCUGAGAGGAUGAUCAGUCACACUGGAACUGAGA
CACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAU
UGGACAAUGGGCGAAAGCCUGAUCCAGCCAUGCCGCGUGU
GUGAAGAAGGUCUUCGGAUUGUAAAGCACUUUAAGUUGGG
AGGAAGGGCAGUAAGUUAAUACCUUGCUGUUUUGACGUUA
CCAACAGAAUAAGCACCGGCUAACUUCGUGCCAGCAGCCG
CGGUAAUACGAAGGGUGCAAGCGUUAAUCGGAAUUACUGG
GCGUAAAGCGCGCGUAGGUGGUUCAGCAAGUUGGAUGUGA
AAUCCCCGGGCUCAACCUGGGAACUGCAUCCAAAACUACU
GAGCUAGAGUACGGUAGAGGGUGGUGGAAUUUCCUGUGUA
GCGGUGAAAUGCGUAGAUAUAGGAAGGAACACCAGUGGCG
AAGGCGACCACCUGGACUGAUACUGACACUGAGGUGCGAA
AGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCA
CGCCGUAAACGAUGUCGACUAGCCGUUGGGAUCCUUGAGA
UCUUAGUGGCGCAGCUAACGCGAUAAGUCGACCGCCUGGG
GAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGG
GGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGC
AACGCGAAGAACCUUACCUGGCCUUGACAUGCUGAGAACU
UUCCAGAGAUGGAUUGGUGCCUUCGGGAACUCAGACACAG
GUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUG
GGUUAAGUCCCGUAACGAGCGCAACCCUUGUCCUUAGUUA
CCAGCACCUCGGGUGGGCACUCUAAGGAGACUGCCGGUGA
CAAACCGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGG
CCCUUACGGCCAGGGCUACACACGUGCUACAAUGGUCGGU
ACAAAGGGUUGCCAAGCCGCGAGGUGGAGCUAAUCCCAUA
AAACCGAUCGUAGUCCGGAUCGCAGUCUGCAACUCGACUG
CGUGAAGUCGGAAUCGCUAGUAAUCGUGAAUCAGAAUGUC
ACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUC
ACACCAUGGGAGUGGGUUGCUCCAGAAGUAGCUAGUCUAA
CCGCAAGGGGGACGGUUACCACGGAGUGAUUCAUGACUGG
GGUGAAGUCGUAACAAGGUAGCCGUAGGGGAACCUGCGGC
UGGAUC
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b: |
QVNMRDMLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIIN
LEKTLPMFNEALTFVERLAAGKNKILFVGTKRSAGKIVRE
EAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQSQ
DGTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVD
HERIAITEANKLGIPVIGVVDTNSSPEGVDYVIPGNDDAI
RAVQLYLNSMAEAVIRGKQGAATSADEFVEEAPA
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c: |
QKVHPNGIRLGIVKEHTSVWYADRKNYADYLFADLKVREY
LQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKGE
DVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSVAQ
QLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEI
ARTEWYREGRVPLHTLRADIDYATYEAHTTYGVIGVKVWI
FKGEV
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d: |
ARYIGPKCKLSRREGTDLFLKSGARALDSKCKAENVPGQH
GQRRGRLSDYGLQLREKQKVRRIYGVLERQFRGYYQEASR
RKGSTGENLLQLLECRLDNVVYRMGFGSTRSESRQLVSHK
AITVNGQTVNIPSYQVKAGDVVAVREKSKNQLRIAQALEL
CGQRGRVEWVEVDLDKKAGTFKSAPARSDLSADINENLIV
ELYSK
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e: |
GYIEKLVQVNRVAKTVKGGRIFAFTALTVVGDGKGRVGFG
RGKAREVPAAIQKAMEAARRNMIQVDLNGTTLQYPTKSAH
GASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYG
STNPVNVVYATFKGLKNMQAPEAVAAKRGKSVEEIL
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f: |
RHYEIVFLVHPDQSEQVGGMVERYTKAIEEDGGKIHRLED
WGRRQLAYAINNVHKAHYVLMNVECSAKALAELEDNFRYN
DAVIRNLVMRRDEAVTEQSEMLKAE
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g: |
RRRVAAKREVLADPKYGSQILAKFMNHVMESGKKAVAERI
VYGALDKVKERGKADPLETFEKALDAIAPLVEVKSRRVGG
ATYQVPVEVRPSRRNALAMRWLVDFARKRGEKSMALRLAG
ELLDAAEGKGAAVKKREDVHRMAEANKAFSHYRF
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h: |
SMQDPLADMLTRIRNAQMAEKTVVSMPSSKLKAAVAKVLK
DEGYIADFQISSEVKPQLSIELKYFEGKPVIEEVKRISRP
GLRQYKSVEQLPKVRGGLGVSIVSTNKGVMTDRAARAAGV
GGEVLCTVF
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i: |
ATQNYGTGRRKTATARVFLRPGTGKISINNRGLDQFFGRE
TARMVVRQPLELTETVEKFDIFVTVVGGGVSGQAGAIRHG
ITRALIEYDETLRSSLRKAGYVTRDAREVERKKVGLRKAR
KRPQYS
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j: |
IRLKAFDHRLIDQSTQEIVETAKRTGAQVRGPIPLPTRKE
RFTVLISPHVNKDARDQYEIRTHKRVLDIVQPTDKTVDAL
MKLDLAAGVEVQISLG
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k: |
KTVVDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFR
GSRKSTPFAAQVAAERAGQAALEYGLKNLDVNVKGPGPGR
ESAVRALNACGYKIASITDVTPIPHNGCRPPKKRR
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l: |
ATINQLVRKPRKRMVDKSDVPALQNCPQRRGVCTRVYTTT
PKKPNSALRKVCRVRLTNGFEVSSYIGGEGHNLQEHSVVL
IRGGRVKDLPGVRYHTVRGSLDTSGVKDRKQGRSKYGAKR
P
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m: |
RIAGVNIPDNKHTVISLTYIYGVGRTTAQSICAATGVNPA
AKIKDLSDEQIDQLRNEVAKITTEGDLRREINMNIKRLMD
LGCYRGLRHRRGLPVRGQRTKTNARTRKGP
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n: |
KESMKNRELKRQLTVAKYAKKRAELKAIIANPNSSAEERW
NAQVALQKQPRDASASRLRNRCRLTGRPHGFYRKFGLSRN
KLREAAMRGDVPGLVKAS
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o: |
LSVEEKAQIVNEYKQAEGDTGSPEVQVALLSANINKLQDH
FKANGKDHHSRRGLIRMVNQRRKLLDYLKGKDVSRYTALI
GRLGLR
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p: |
MVTIRLARGGSKKRPFYHLTVTNSRNARDGRFVERIGFFN
PVATGGEVRLSVDQERATYWLGQGAQPSERVAQLLKDA
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q: |
RTLTGRVVSDKMDKTVTVLIERRVKHPIYGKYVKRSTKLH
AHDESNQCRIGDLVTIRETRPLAKTKAWTLVDIVER
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r: |
FFRRRRFCRFTAEGVKEIDYKDLNTLKAYVSETGKIVPSR
ITGTKAKYQRQLATAIKRARYLALLPYTDSH
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s: |
PRSLKKGPFIDLHLLKKVEVAVEKNDRKPIKTWSRRSMIL
PHMVGLTIAVHNGRQHVPVLVNEDMVGHKLGEFAATRTYR
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t: |
NTPSAKKRAKQAEKRRSHNASLRSMVRTYIKNVVKAIDAK
DLEKAQAAFTAAVPVIDRMADKGIIHKNKAARHKSRLSGH
IKALS
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u: |
KVKEEPFDVALRRFKRSCEKAGALAEVRSREFYEKPTAER
KRKAAAAVKRHAKKVQREQRRR
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Description
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(1) |
30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, 30S ribosomal protein S5, 30S ribosomal protein S6, 30S ribosomal protein S7, 30S ribosomal protein S8, 30S ribosomal protein S9, 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, 30S ribosomal protein S13, 30S ribosomal protein S14, 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, 30S ribosomal protein S18, 30S ribosomal protein S19, 30S ribosomal protein S20, 30S ribosomal protein S21/RNA Complex
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