eF-site ID
|
6rzz-BCDEFGHJKLMNOPQRSTUVWXYZabcdefghijklmnoprsuvw |
PDB Code
|
6rzz |
Chain
|
B, C, D, E, F, G, H, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, r, s, u, v, w |
|
|
|
Title
|
Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles |
Classification
|
RIBOSOME |
Compound
|
25S ribosomal RNA |
Source
|
ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; ORGANISM_COMMON: Baker's yeast; |
|
Sequence
|
B: |
GRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYI
RGIVKQIVHDSGRGAPLAKVVFRDPYKYRLREEIFIANEG
VHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPG
DRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSD
ARGVIGVIAGGGRVDKPLLKAGRAFHKYRLKRNSWPKTRG
VAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR
RTGLLRG
|
C: |
SHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPV
ALTSFLGYKAGMTTIVRDLDRPGSKFHKREVVEAVTVVDT
PPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN
WYKSKKKAFTKYSAKYAQDGAGIERELARIKKYASVVRVL
VHTQIRKTPLAQKKAHLAEIQLNGGSISEKVDWAREHFEK
TVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRK
THRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHK
IYRVGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDF
IMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDT
ASKFGKGRFQTPAEKHAFMGT
|
D: |
SRPQVTVHSLTGEATANALPLPAVFSAPIRPDIVHTVFTS
VNKNKRQAYAVSEKAGHQTSAESWGTGRAVARIPRVGGGG
TGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYA
TASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQK
TKEAVAALKAVGAHSDLLKVLKSKKLRAGKGKYRNRRWTQ
RRGPLVVYAEDNGIVKALRNVPGVETANVASLNLLQLAPG
AHLGRFVIWTEAAFTKLDQVWGSETVASSKVGYTLPSHII
STSDVTRIINSSEIQSAIRPAGQATQKRTHVLKKNPLKNK
QVLLRLNPYAKVFAAEKLGSKKAEKTGTKPAAVFTETLKH
D
|
E: |
QNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTP
VQSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGLK
VKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGM
DFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQ
KYDADVLDK
|
F: |
MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKH
IDVTFTKVNNQLIKVAVHNGGRKHVAALRTVKSLVDNMIT
GVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD
KKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAAD
LQQICRVRNKDIRKFLDGIYVSHKGFITE
|
G: |
SAQKAPKWYPSEDVAALKKTRKAARPQKLRASLVPGTVLI
LLAGRFRGKRVVYLKHLEDNTLLISGPFKVNGVPLRRVNA
RYVIATSTKVSVEGVNVEKFNVEYFAKEKLTKKEKKEANL
FPEQQNKEIKAERVEDQKVVDKALIAEIKKTPLLKQYLSA
SFSLKNGDKPHMLKF
|
H: |
PLTHSTPKNFGIGQAVQPKRNLSRYVKWPEYVRVQRQKKI
LSIRLKVPPTIAQFQYTLDRNTAAETFKLFNKYRPETAAE
KKERLTKEAAAVAEGKSKQDASPKPYAVKYGLNHVVALIE
NKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGKA
RLGTLVNQKTSAVAALTEVRAEDEAALAKLVSTIDANFAD
KYDEVKKHWGGGILGNKAQAKMD
|
J: |
SQPVVVIDAKDHLLGRLASTIAKQVLNGQKIVVVRAEALN
ISGEFFRNKLKYHDFLRKATAFNKTRGPFHFRAPSRILYK
AIRGMVSHKTARGKAALERLKIFEGIPPPYDKKKRVVVPQ
ALRVLRLKPGRKYTTLGKLSTSVGWKYEDVVAKLEDKRKV
RSAEYYAKKRAFTKKVSSASAAASESDVAKQLASFGY
|
K: |
AISKNLPILKNHFRKHWQERVKVHFDQAGKKVSRRNARAT
RAAKIAPRPLDLLRPVVRAPTVKYNRKVRAGRGFTLAEVK
AAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQRLKEYQS
KIIVFPRNGKAPEAEQVLSAAATFPIAQPATDVEARAVQD
NGESAFRTLRLARSEKKFRGIREKRA
|
L: |
SGNGAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKG
SGSRLNRLPAASLGDMVMATVKKGKPELRKKVMPAIVVRQ
AKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKE
CADLWPRVASNSGVVV
|
M: |
STDSIVKASNWRLVEVGRVVLIKKGQSAGKLAAIVEIIDQ
KKVLIDGPKAGVPRQAINLGQVVLTPLTFALPRGARTATV
SKKWAAAAVCEKWAASSWAKKIAQRERRAALTDFERFQVM
VLRKQKRYTVKKALA
|
N: |
PSRFTKTRKHRGHVSAGKGRIGKHRKHPGGRGMAGGQHHH
RINMDKYHPGYFGKVGMRYFHKQQAHFWKPVLNLDKLWTL
IPEDKRDQYLKSASKETAPVIDTLAAGYGKILGKGRIPNV
PVIVKARFVSKLAEEKIRAAGGVVELIA
|
O: |
GAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRAAR
PTRPDKARRLGYKAKQGFVIYRVRVRRGNRKRPVPKGATY
GKPTNQGVNELKYQRSLRATAEERVGRRAANLRVLNSYWV
NQDSTYKYFEVILVDPQHKAIRRDARYNWICDPVHKHREA
RGLTATGKKSRGINKGHKFNNTKAGRRKTWKRQNTLSLWR
YRK
|
P: |
KSSAYSSRFQTPFRRRREGKTDYYQRKRLVTQHKAKYNTP
KYRLVVRFTNKDIICQIISSTITGDVVLAAAYSHELPRYG
ITHGLTNWAAAYATGLLIARRTLQKLGLDETYKGVEEVEG
EYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGAS
DGGLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQY
MEELADDDEERFSELFKGYLADDIDADSLEDIYTSAHEAI
RADPAFKPTEKKFTKEQYAAESKKYRQTK
|
Q: |
GIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTD
APFNKVVLKALFLSKINRPPVSVSRIARALKQEGAANKTV
VVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGEC
ITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMGPHKGK
APRILSTGRKFERARGRRRSKGFKV
|
R: |
ANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAI
RKLVKNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGKR
KGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYH
VLYKESKGNAFKHKRALVEHIIQAKADAQR
|
S: |
AHFKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRY
WYFLQKLHKVKKASGEIVSINQINEAHPTKVKNFGVWVRY
DSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSI
HILKVAEIEKTADVKRQYVKQFLTKDLKFPLPHRVQKSTK
TFSYKRPSTFY
|
T: |
GKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVD
IKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVG
NRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKA
QGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYETFI
|
U: |
ARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWEL
TKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGKEFGVTKA
RWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQ
APKQRRRTYRAHGRINKYESSPSHIELVVTEKEE
|
V: |
IAKTFTVDVSSPTENGVFDPASYAKYLIDHIKVEGAVGNL
GNAVTVTEDGTVVTVVSTAKFSGKYLKYLTKKYLKKNQLR
DWIRFVSTKTNEYRLAFYQ
|
W: |
ALKVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYKV
IEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKEL
YEVDVLKVNTLVRPNGTKKAYVRLTADYDALDIANRIGYI
|
X: |
AKQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRA
QYGIKALPIRRDDEVLVVRGSKKGQEGKISSVYRLKFAVQ
VDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQR
KGGKL
|
Y: |
AKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHA
LVAGIERYPLKVTKKHGAKKVAKRTKIKPFIKVVNYNHLL
PTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEER
HQAGKNQWFFSKLRF
|
Z: |
GVKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRPSLP
KIKTVRKSIACVLTVINEQQREAVRQLYKGKKYQPKDLRA
KKTRALRRALTKFEASQVTEKQRKKQIAFPQRKYAIKA
|
a: |
NHTAHNQTRKAHRNGIKKPKTYKYPSLKGVDPKFRRNHKH
ALHGTAKALAAA
|
b: |
VAAERAARKAANKEKRAIILERNAAYQKEYETAERNIIQA
KRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKVLQL
LRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTIR
QLVYKRGFGKINKQRVPLSDNAIIEANLGKYGILSIDDLI
HEIITVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQ
GGSFGNREEFINKLVKSMN
|
c: |
SINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANT
PVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVG
VVSILEAGDSDILTTLA
|
d: |
DVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMG
TDDVRLAPELNQAIWKRGVKGVEYRLRLRISRKRNEEEDA
KNPLFSYVEPVLVASAKGLQTVVVEED
|
e: |
MASLPHPKIVKKHTKKFKRHHSDRYHRVAENWRKQKGIDS
VVRRRFRGNISQPKIGYGSNKKTKFLSPSGHKTFLVANVK
DLETLTMHTKTYAAEIAHNISAKNRVVILARAKALGIKVT
NPKGRLA
|
f: |
AESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQDA
QFYLGKRIAYVYRASKEVRGSKIRVMWGKVTRTHGNSGVV
RATFRNNLPAKTFGASVRIFLYPSNI
|
g: |
AQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATR
PKCGDCGSALQGISTLRPRQYATVSKTHKTVSRAYGGSRC
ANCVKERIIRAFLIEEQKIVKKV
|
h: |
VKTGIAIGLNKGKKVTSMTPAPKISYKKGAASNRTKFVRS
LVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSFTR
AKAKVEEMNNIIAASRRH
|
i: |
GKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPA
AKTRSYNWGAKAKRRHTTGTGRMRYLKHVSRRFKNGFQTG
SASK
|
j: |
AREITDIKQFLELTRRADVKTATVKINKKLNKAGKPFRQT
KFKVRGSSSLYTLVINDAGKAKKLIQSLPPTLKVNRL
|
k: |
AAQKSFRIKQKMAKAKKQNRPLPQWIRLRTNNTIRYNAKR
RNWRRTKMNI
|
l: |
VNVPKTRKTYCKGKTCRKHTQHKVTQYKAGKASLFAQGKR
RYDRKQSGFGGQTKPVFHKKAKTTKKVVLRLECVKCKTRA
QLTLKRCKHFELGG
|
m: |
AKRTKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSF
CGKKTVKRGAAGIWTCSCCKKTVAGGAYTVSTAAAATVRS
TIRRLREMV
|
n: |
MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEA
ELGDAIPIVHTTIAGTRIIGRMTAGNRRGLLVPTQTTDQE
LQHLRNSLPDSVKIQRVEERLSALGNVICCNDYVALVHPD
IDRETEELISDVLGVEVFRQTISGNILVGSYCSLSNQGGL
VHPQTSVQDQEELSSLLQVPLVAGTVNRGSSVVGAGMVVN
DYLAVTGLDTTAPELSVIESIFRL
|
o: |
DLIVPRRPEWNEGMSKFQLDRQEKEAFLEWRRKLAHLQES
NEDLLLTPFERNIEVWKQLWRVVERSDLVVQIVDARNPLL
FRSVDLERYVKESDDRKANLLLVNKADLLTKKQRIAWAKY
FISKNISFTFYSAVMEKVKILSIDINIGLVGYPNVGKSST
INSLVGAKKVSVSSTPGKTKHFQTIKLSDSVMLCDCPGLV
FPNFAYNKGELVCNGVLPIDQLRDYIGPAGLVAERIPKYY
IEAIYGIHIQTKSRDEGGNGDIPTAQELLVAYARARGYMT
QGYGSADEPRASRYILKDYVNGKLLYVNPPPHLEDDTPYT
|
p: |
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXX
|
r: |
ILQESVLNKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQ
LTVPELCLLTDSFILTRLEQYYKNKVNERGIAIPTTIDID
QISGGWCPEIDDTQNLLNWNKGKDSTFASSVTGTLRPGDL
VKITLGVHIDGYTSEVSHTMVIYPVDETKPILQPTGPLLG
GKADAVAAAHIAMETVVALLACALTPEKLPASLGGTSSGI
TGQLIRTIVDTIARSYNCGVVPGSRVRRIRRFLAGQNEGI
VAEREYKGVVWTESHQEADLLSAIPSDDFVVQSGEVYLID
LKMASLEHCTKKGLVTLETVDSYTGKSHKAGELIARPGAY
VRDFAQTHILKLKTSRQLLTKIDKQGVYPFKLSHLSSNFP
FVHENEEELQSLKKDLKSFRLGMSEISNNYLCVESPIQIA
RWVPWDHILKATNPLPLPKLGVSAIKLKSLMNSTKESISL
PVARECNTIVLCDSSVSTTDRPELLRLTGGSKTCQPSWIH
SQHELNPQDSIVQGIFQLATLAKDLLLKETQPMKQK
|
s: |
SKVTAVRCKKCRTKLALSTSFIAHDPPSKESSEGHFIKRA
ANSHRIIDIQESQANCSHFFIEPLKWMQPELQGKQELEGK
FSCPGCSSKVGGYNWKGSRCSCGKWVIPAIHLQTSKVDQF
PLQSTALP
|
u: |
AERVMQEKLRNRVDIPLEQCLFCEHNKHFKDVEENLEHMF
RTHGFYIPEQKYLVDKIGLVKYMSEKIGLGNICIVCNYQG
RTLTAVRQHMLAKRHCKIPYESEDERLEISEFYDFTSNDG
IELHLPTGIKVGHRSLQRYYKQDLKPEVILTEGQGTLVAA
ETRSFLPAFDKKGVQTQQRVWQTERFDKKRLDKRSAKFVN
NQPHYRDQLLQ
|
v: |
MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLF
KQRKNPRRIAWTVLFRKHHK
|
w: |
TLLCCNCGTPIDGSTGLVMCYDCIKLTVDITQGIPREANI
SFCRNCERFLQPPGQWIRAELESRELLAICLRRLKGLTKV
RLVDASFIWTEPHSRRIRIKLTVQGEAMTNTIIQQTFEVE
YIVIAMQCPDCARSYTTNTWRATVQIRQKVPHKRTFLFLE
QLILKHNAHVDTISISEAKDGLDFFYAQKNHAVKMIDFLN
AVVPIKHKKSEELISQDTHTGASTYKFSYSVEIVPICKDD
LVVLPKKLAKSMGNISQFVLCSKISNTVQFMDPTTLQTAD
LSPSVYWRAPFNALADVTQLVEFIVLDVDSTGISRGNRVL
ADITVARTSDLGVNDQVYYVRSHLGGICHAGDSVMGYFIA
NSNYNSDLFDGLNIDYVPDVVLVKKLYQR
|
|
Description
|
|
|
|
1)
|
chain |
g |
residue |
44 |
type |
|
sequence |
C
|
description |
binding site for residue ZN g 201
|
source |
: AC1
|
|
2)
|
chain |
g |
residue |
47 |
type |
|
sequence |
C
|
description |
binding site for residue ZN g 201
|
source |
: AC1
|
|
3)
|
chain |
g |
residue |
81 |
type |
|
sequence |
C
|
description |
binding site for residue ZN g 201
|
source |
: AC1
|
|
4)
|
chain |
g |
residue |
84 |
type |
|
sequence |
C
|
description |
binding site for residue ZN g 201
|
source |
: AC1
|
|
5)
|
chain |
i |
residue |
19 |
type |
|
sequence |
C
|
description |
binding site for residue ZN i 101
|
source |
: AC2
|
|
6)
|
chain |
i |
residue |
22 |
type |
|
sequence |
C
|
description |
binding site for residue ZN i 101
|
source |
: AC2
|
|
7)
|
chain |
i |
residue |
34 |
type |
|
sequence |
C
|
description |
binding site for residue ZN i 101
|
source |
: AC2
|
|
8)
|
chain |
i |
residue |
37 |
type |
|
sequence |
C
|
description |
binding site for residue ZN i 101
|
source |
: AC2
|
|
9)
|
chain |
l |
residue |
12 |
type |
|
sequence |
C
|
description |
binding site for residue ZN l 201
|
source |
: AC3
|
|
10)
|
chain |
l |
residue |
17 |
type |
|
sequence |
C
|
description |
binding site for residue ZN l 201
|
source |
: AC3
|
|
11)
|
chain |
l |
residue |
74 |
type |
|
sequence |
C
|
description |
binding site for residue ZN l 201
|
source |
: AC3
|
|
12)
|
chain |
l |
residue |
77 |
type |
|
sequence |
C
|
description |
binding site for residue ZN l 201
|
source |
: AC3
|
|
13)
|
chain |
m |
residue |
39 |
type |
|
sequence |
C
|
description |
binding site for residue ZN m 101
|
source |
: AC4
|
|
14)
|
chain |
m |
residue |
42 |
type |
|
sequence |
C
|
description |
binding site for residue ZN m 101
|
source |
: AC4
|
|
15)
|
chain |
m |
residue |
57 |
type |
|
sequence |
C
|
description |
binding site for residue ZN m 101
|
source |
: AC4
|
|
16)
|
chain |
m |
residue |
60 |
type |
|
sequence |
C
|
description |
binding site for residue ZN m 101
|
source |
: AC4
|
|
17)
|
chain |
s |
residue |
232 |
type |
|
sequence |
C
|
description |
binding site for residue ZN s 401
|
source |
: AC5
|
|
18)
|
chain |
s |
residue |
235 |
type |
|
sequence |
C
|
description |
binding site for residue ZN s 401
|
source |
: AC5
|
|
19)
|
chain |
s |
residue |
307 |
type |
|
sequence |
C
|
description |
binding site for residue ZN s 401
|
source |
: AC5
|
|
20)
|
chain |
s |
residue |
310 |
type |
|
sequence |
C
|
description |
binding site for residue ZN s 401
|
source |
: AC5
|
|
21)
|
chain |
s |
residue |
248 |
type |
|
sequence |
H
|
description |
binding site for residue ZN s 402
|
source |
: AC6
|
|
22)
|
chain |
s |
residue |
326 |
type |
|
sequence |
C
|
description |
binding site for residue ZN s 402
|
source |
: AC6
|
|
23)
|
chain |
u |
residue |
217 |
type |
|
sequence |
C
|
description |
binding site for residue ZN u 401
|
source |
: AC7
|
|
24)
|
chain |
u |
residue |
220 |
type |
|
sequence |
C
|
description |
binding site for residue ZN u 401
|
source |
: AC7
|
|
25)
|
chain |
u |
residue |
233 |
type |
|
sequence |
H
|
description |
binding site for residue ZN u 401
|
source |
: AC7
|
|
26)
|
chain |
u |
residue |
239 |
type |
|
sequence |
H
|
description |
binding site for residue ZN u 401
|
source |
: AC7
|
|
27)
|
chain |
u |
residue |
164 |
type |
|
sequence |
C
|
description |
binding site for residue ZN u 402
|
source |
: AC8
|
|
28)
|
chain |
u |
residue |
167 |
type |
|
sequence |
C
|
description |
binding site for residue ZN u 402
|
source |
: AC8
|
|
29)
|
chain |
u |
residue |
182 |
type |
|
sequence |
H
|
description |
binding site for residue ZN u 402
|
source |
: AC8
|
|
30)
|
chain |
u |
residue |
187 |
type |
|
sequence |
H
|
description |
binding site for residue ZN u 402
|
source |
: AC8
|
|
31)
|
chain |
w |
residue |
58 |
type |
|
sequence |
C
|
description |
binding site for residue ZN w 601
|
source |
: AC9
|
|
32)
|
chain |
w |
residue |
61 |
type |
|
sequence |
C
|
description |
binding site for residue ZN w 601
|
source |
: AC9
|
|
33)
|
chain |
w |
residue |
143 |
type |
|
sequence |
C
|
description |
binding site for residue ZN w 601
|
source |
: AC9
|
|
34)
|
chain |
w |
residue |
146 |
type |
|
sequence |
C
|
description |
binding site for residue ZN w 601
|
source |
: AC9
|
|
35)
|
chain |
w |
residue |
19 |
type |
|
sequence |
C
|
description |
binding site for residue ZN w 602
|
source |
: AD1
|
|
36)
|
chain |
w |
residue |
22 |
type |
|
sequence |
C
|
description |
binding site for residue ZN w 602
|
source |
: AD1
|
|
37)
|
chain |
w |
residue |
35 |
type |
|
sequence |
C
|
description |
binding site for residue ZN w 602
|
source |
: AD1
|
|
38)
|
chain |
w |
residue |
38 |
type |
|
sequence |
C
|
description |
binding site for residue ZN w 602
|
source |
: AD1
|
|
39)
|
chain |
L |
residue |
76-102 |
type |
prosite |
sequence |
AIVVRQAKSWRRRDGVFLYFEDNAGVI
|
description |
RIBOSOMAL_L14 Ribosomal protein L14 signature. AIVVrqakswrrr.DGvflyFedNagVI
|
source |
prosite : PS00049
|
|
40)
|
chain |
W |
residue |
120-135 |
type |
prosite |
sequence |
KKAYVRLTADYDALDI
|
description |
RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVRLTadydaldI
|
source |
prosite : PS00050
|
|
41)
|
chain |
k |
residue |
30-46 |
type |
prosite |
sequence |
RTNNTIRYNAKRRNWRR
|
description |
RIBOSOMAL_L39E Ribosomal protein L39e signature. RTnntIryNakrRNWRR
|
source |
prosite : PS00051
|
|
42)
|
chain |
E |
residue |
37-53 |
type |
prosite |
sequence |
LEQLSGQTPVQSKARYT
|
description |
RIBOSOMAL_L5 Ribosomal protein L5 signature. LeqLSGQtpVqSkARyT
|
source |
prosite : PS00358
|
|
43)
|
chain |
U |
residue |
126-150 |
type |
prosite |
sequence |
RRRTYRAHGRINKYESSPSHIELVV
|
description |
RIBOSOMAL_L22 Ribosomal protein L22 signature. RrrTyRAhGRinkyesspSHIELvV
|
source |
prosite : PS00464
|
|
44)
|
chain |
B |
residue |
197-208 |
type |
prosite |
sequence |
PKTRGVAMNPVD
|
description |
RIBOSOMAL_L2 Ribosomal protein L2 signature. PktRGVAmNPvD
|
source |
prosite : PS00467
|
|
45)
|
chain |
C |
residue |
209-232 |
type |
prosite |
sequence |
FEQNEMIDAIAVTKGHGFEGVTHR
|
description |
RIBOSOMAL_L3 Ribosomal protein L3 signature. FeqnemiDaiAvTkGHGfeGvthR
|
source |
prosite : PS00474
|
|
46)
|
chain |
N |
residue |
111-142 |
type |
prosite |
sequence |
KILGKGRIPNVPVIVKARFVSKLAEEKIRAAG
|
description |
RIBOSOMAL_L15 Ribosomal protein L15 signature. KILGkGrIpnvp.ViVkarfVSklAeekIraaG
|
source |
prosite : PS00475
|
|
47)
|
chain |
R |
residue |
7-26 |
type |
prosite |
sequence |
QKRLAASVVGVGKRKVWLDP
|
description |
RIBOSOMAL_L19E Ribosomal protein L19e signature. QKRLaAsvvgVGkrkVWLDP
|
source |
prosite : PS00526
|
|
48)
|
chain |
Z |
residue |
40-54 |
type |
prosite |
sequence |
SLPKIKTVRKSIACV
|
description |
RIBOSOMAL_L29 Ribosomal protein L29 signature. SLPKIKtVRKSIACV
|
source |
prosite : PS00579
|
|
49)
|
chain |
e |
residue |
17-37 |
type |
prosite |
sequence |
FKRHHSDRYHRVAENWRKQKG
|
description |
RIBOSOMAL_L32E Ribosomal protein L32e signature. FkRhhsdRyhRVaen..WRKqkG
|
source |
prosite : PS00580
|
|
50)
|
chain |
b |
residue |
102-134 |
type |
prosite |
sequence |
VLQLLRLTRINSGTFVKVTKATLELLKLIEPYV
|
description |
RIBOSOMAL_L30 Ribosomal protein L30 signature. VLqlLrLtRinSgTfvkvtkatleLLklIepYV
|
source |
prosite : PS00634
|
|
51)
|
chain |
F |
residue |
163-184 |
type |
prosite |
sequence |
QICRVRNKDIRKFLDGIYVSHK
|
description |
RIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QicrVrnKdiRkFlDGIYVshK
|
source |
prosite : PS00700
|
|
52)
|
chain |
c |
residue |
20-44 |
type |
prosite |
sequence |
SGKYTLGYKSTVKSLRQGKSKLIII
|
description |
RIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkytlGyKstVKslRqGksKlIII
|
source |
prosite : PS00709
|
|
53)
|
chain |
J |
residue |
83-106 |
type |
prosite |
sequence |
IRGMVSHKTARGKAALERLKIFEG
|
description |
RIBOSOMAL_L13 Ribosomal protein L13 signature. IRGMVShktarGKaalerLkIFeG
|
source |
prosite : PS00783
|
|
54)
|
chain |
D |
residue |
114-140 |
type |
prosite |
sequence |
NHNEKRYATASAIAATAVASLVLARGH
|
description |
RIBOSOMAL_L1E Ribosomal protein L1e signature. NhneKryATaSAIaATAvaslvlaRGH
|
source |
prosite : PS00939
|
|
55)
|
chain |
c |
residue |
76-96 |
type |
prosite |
sequence |
ELGTAVGKLFRVGVVSILEAG
|
description |
RIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. ELGTavGKlfrvgvVsIlEaG
|
source |
prosite : PS00993
|
|
56)
|
chain |
v |
residue |
8-25 |
type |
prosite |
sequence |
FSGAKIYPGRGTLFVRGD
|
description |
RIBOSOMAL_L24E Ribosomal protein L24e signature. FsGakIyPGrGtlFvRgD
|
source |
prosite : PS01073
|
|
57)
|
chain |
i |
residue |
4-23 |
type |
prosite |
sequence |
GTPSFGKRHNKSHTLCNRCG
|
description |
RIBOSOMAL_L37E Ribosomal protein L37e signature. GTpSfGkRhnks.HtlCnRCG
|
source |
prosite : PS01077
|
|
58)
|
chain |
H |
residue |
170-187 |
type |
prosite |
sequence |
CKKMGVPYAIVKGKARLG
|
description |
RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CkkmgVPYaiVkGKarLG
|
source |
prosite : PS01082
|
|
59)
|
chain |
K |
residue |
70-84 |
type |
prosite |
sequence |
RAGRGFTLAEVKAAG
|
description |
RIBOSOMAL_L13E Ribosomal protein L13e signature. RaGRGFTLaEVkaaG
|
source |
prosite : PS01104
|
|
60)
|
chain |
f |
residue |
69-90 |
type |
prosite |
sequence |
GKVTRTHGNSGVVRATFRNNLP
|
description |
RIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKVtRtHGnsGvVrAtFrnnLP
|
source |
prosite : PS01105
|
|
61)
|
chain |
Q |
residue |
50-67 |
type |
prosite |
sequence |
KALFLSKINRPPVSVSRI
|
description |
RIBOSOMAL_L18E Ribosomal protein L18e signature. KaLflSKinRPpVSVsRI
|
source |
prosite : PS01106
|
|
62)
|
chain |
Y |
residue |
125-136 |
type |
prosite |
sequence |
GKNQWFFSKLRF
|
description |
RIBOSOMAL_L27E Ribosomal protein L27e signature. GKNqWFFskLRF
|
source |
prosite : PS01107
|
|
63)
|
chain |
X |
residue |
53-70 |
type |
prosite |
sequence |
DDEVLVVRGSKKGQEGKI
|
description |
RIBOSOMAL_L24 Ribosomal protein L24 signature. DDeVlVVrGskKGqe.GkI
|
source |
prosite : PS01108
|
|
64)
|
chain |
d |
residue |
49-63 |
type |
prosite |
sequence |
VRLAPELNQAIWKRG
|
description |
RIBOSOMAL_L31E Ribosomal protein L31e signature. VRLApeLNqAiWkRG
|
source |
prosite : PS01144
|
|
65)
|
chain |
g |
residue |
15-28 |
type |
prosite |
sequence |
TRSNKIKVVKTPGG
|
description |
RIBOSOMAL_L34E Ribosomal protein L34e signature. TrSnKikvvKTPGG
|
source |
prosite : PS01145
|
|
66)
|
chain |
G |
residue |
72-90 |
type |
prosite |
sequence |
NGVPLRRVNARYVIATSTK
|
description |
RIBOSOMAL_L6E Ribosomal protein L6e signature. NgvPLRRvnarYVIATSt.K
|
source |
prosite : PS01170
|
|
67)
|
chain |
T |
residue |
37-62 |
type |
prosite |
sequence |
GDIVDIKANGSIQKGMPHKFYQGKTG
|
description |
RIBOSOMAL_L21E Ribosomal protein L21e signature. GDiVdikangsiqk.GmpHkfYqGkTG
|
source |
prosite : PS01171
|
|
68)
|
chain |
l |
residue |
63-74 |
type |
prosite |
sequence |
KTTKKVVLRLEC
|
description |
RIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKvvLRleC
|
source |
prosite : PS01172
|
|
69)
|
chain |
h |
residue |
52-62 |
type |
prosite |
sequence |
PYERRLIDLIR
|
description |
RIBOSOMAL_L36E Ribosomal protein L36e signature. PYERRlIDLIR
|
source |
prosite : PS01190
|
|
70)
|
chain |
O |
residue |
46-69 |
type |
prosite |
sequence |
DKARRLGYKAKQGFVIYRVRVRRG
|
description |
RIBOSOMAL_L15E Ribosomal protein L15e signature. DKARrLGYkAkqGFVIYRvRVrRG
|
source |
prosite : PS01194
|
|
71)
|
chain |
v |
residue |
7 |
type |
MOD_RES |
sequence |
S
|
description |
Phosphoserine => ECO:0000250|UniProtKB:P24000
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
72)
|
chain |
o |
residue |
387 |
type |
MOD_RES |
sequence |
D
|
description |
Phosphoserine => ECO:0000250|UniProtKB:P24000
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
73)
|
chain |
R |
residue |
91 |
type |
MOD_RES |
sequence |
S
|
description |
Phosphoserine => ECO:0000250|UniProtKB:P24000
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
74)
|
chain |
u |
residue |
162-187 |
type |
ZN_FING |
sequence |
EQCLFCEHNKHFKDVEENLEHMFRTH
|
description |
C2H2-type 2
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
75)
|
chain |
L |
residue |
110 |
type |
ZN_FING |
sequence |
K
|
description |
C2H2-type 2
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
76)
|
chain |
S |
residue |
131 |
type |
ZN_FING |
sequence |
K
|
description |
C2H2-type 2
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
77)
|
chain |
S |
residue |
149 |
type |
ZN_FING |
sequence |
K
|
description |
C2H2-type 2
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
78)
|
chain |
R |
residue |
146 |
type |
ZN_FING |
sequence |
K
|
description |
C2H2-type 2
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
79)
|
chain |
u |
residue |
215-239 |
type |
ZN_FING |
sequence |
NICIVCNYQGRTLTAVRQHMLAKRH
|
description |
C2H2-type 3
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
80)
|
chain |
B |
residue |
93 |
type |
ZN_FING |
sequence |
K
|
description |
C2H2-type 3
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
81)
|
chain |
B |
residue |
119 |
type |
ZN_FING |
sequence |
K
|
description |
C2H2-type 3
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
82)
|
chain |
B |
residue |
145 |
type |
ZN_FING |
sequence |
K
|
description |
C2H2-type 3
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
83)
|
chain |
J |
residue |
187 |
type |
MOD_RES |
sequence |
S
|
description |
Phosphoserine => ECO:0007744|PubMed:17330950, ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
|
source |
Swiss-Prot : SWS_FT_FI5
|
|
84)
|
chain |
C |
residue |
136 |
type |
MOD_RES |
sequence |
K
|
description |
Phosphoserine => ECO:0007744|PubMed:17330950, ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
|
source |
Swiss-Prot : SWS_FT_FI5
|
|
85)
|
chain |
J |
residue |
176 |
type |
CROSSLNK |
sequence |
K
|
description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047
|
source |
Swiss-Prot : SWS_FT_FI6
|
|