eF-site ID 6roj-A
PDB Code 6roj
Chain A

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Title Cryo-EM structure of the activated Drs2p-Cdc50p
Classification LIPID TRANSPORT
Compound Probable phospholipid-transporting ATPase DRS2,Oxaloacetate decarboxylase alpha chain
Source (CDC50_YEAST)
Sequence A:  PRVIHINDSLANSSFGYSDNHISTTKYNFATFLPKFLFQE
FSKYANLFFLCTSAIQQVPHVSPTNRYTTIGTLLVVLIVS
AMKECIEDIKRANSDKELNNSTAEIFSEAHDDFVEKRWID
IRVGDIIRVKSEEPIPADTIILSSSEPEGLCYIETANLDG
ETNLKIKQSRVETAKFIDVKTLKNMNGKVVSEQPNSSLYT
YEGTMTLNDRQIPLSPDQMILRGATLRNTAWIFGLVIFTG
HETKLLRNATATPIKRTAVEKIINRQIIALFTVLIVLILI
SSIGNVIMSTADAKHLSYLYLEGTNKAGLFFKDFLTFWIL
FSNLVPISLFVTVELIKYYQAFMIGSDLDLYYEKTDTPTV
VRTSSLVEELGQIEYIFSXKTGTLTRNIMEFKSCSIAGHC
YIDKIPEDKTATVEDGIEVGYRKFDDLKKKLNDPSDEDSP
IINDFLTLLATCHTVIPEFQSDGSIKYQAASPDEGALVQG
GADLGYKFIIRKPNSVTVLLEETGEEKEYQLLNICEFNST
RKRMSAIFRFPDGSIKLFCKGADTVILERLDDEANQYVEA
TMRHLEDYASEGLRTLCLAMRDISEGEYEEWNSIYNEAAT
TLDNRAEKLDEAANLIEKNLILIGATAIEDKLQDGVPETI
HTLQEAGIKIWVLTGDRQETAINIGMSCRLLSEDMNLLII
NEETRDDTERNLLEKINALNEHQLSTHDMNTLALVIDGKS
LGFALEPELEDYLLTVAKLCKAVICCRVSPLQKALVVKMV
KRKSSSLLLAIGDGANDVSMIQAAHVGVGISGMEGMQAAR
SADIAVGQFKFLKKLLLVHGSWSYQRISVAILYSFYKNTA
LYMTQFWYVFANAFSGQSIMESWTMSFYNLFFTVWPPFVI
GVFDQFVSSRLLERYPQLYKLGQKGQFFSVYIFWGWIING
FFHSAIVFIGTILIYRYGFALNMHGELADHWSWGVTVYTT
SVIIVLGKAALVTNQWTKFTLIAIPGSLLFWLIFFPIYAS
IFPHANISREYYGVVKHTYGSGVFWLTLIVLPIFALVRDF
LWKYYKRMYEPETYHVIQEMQKYN
Description (1)  Probable phospholipid-transporting ATPase DRS2,Oxaloacetate decarboxylase alpha chain (E.C.7.6.2.1,7.2.4.2), Cell division control protein 50


Functional site

1) chain A
residue 703
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:34023399, ECO:0007744|PDB:7OH5, ECO:0007744|PDB:7OH7
source Swiss-Prot : SWS_FT_FI8

2) chain A
residue 756
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:34023399, ECO:0007744|PDB:7OH5
source Swiss-Prot : SWS_FT_FI9

3) chain A
residue 835
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:34023399, ECO:0007744|PDB:7OH5
source Swiss-Prot : SWS_FT_FI9

4) chain A
residue 1149
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:34023399, ECO:0007744|PDB:7OH5
source Swiss-Prot : SWS_FT_FI9

5) chain A
residue 958
type BINDING
sequence D
description BINDING => ECO:0000250|UniProtKB:Q8NB49
source Swiss-Prot : SWS_FT_FI10

6) chain A
residue 1219
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:31243363, ECO:0000269|PubMed:34023399, ECO:0007744|PDB:6ROI, ECO:0007744|PDB:7OH4, ECO:0007744|PDB:7OH5, ECO:0007744|PDB:7OH6
source Swiss-Prot : SWS_FT_FI11

7) chain A
residue 1223
type BINDING
sequence W
description BINDING => ECO:0000269|PubMed:31243363, ECO:0000269|PubMed:34023399, ECO:0007744|PDB:6ROI, ECO:0007744|PDB:7OH4, ECO:0007744|PDB:7OH7
source Swiss-Prot : SWS_FT_FI12

8) chain A
residue 1224
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:31243363, ECO:0000269|PubMed:34023399, ECO:0007744|PDB:6ROI, ECO:0007744|PDB:6ROJ, ECO:0007744|PDB:7OH4, ECO:0007744|PDB:7OH5, ECO:0007744|PDB:7OH6
source Swiss-Prot : SWS_FT_FI13

9) chain A
residue 1235
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:31243363, ECO:0000269|PubMed:34023399, ECO:0007744|PDB:6ROI, ECO:0007744|PDB:7OH7
source Swiss-Prot : SWS_FT_FI14

10) chain A
residue 1236
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:31243363, ECO:0000269|PubMed:34023399, ECO:0007744|PDB:6ROI, ECO:0007744|PDB:6ROJ, ECO:0007744|PDB:7OH4, ECO:0007744|PDB:7OH5, ECO:0007744|PDB:7OH6, ECO:0007744|PDB:7OH7
source Swiss-Prot : SWS_FT_FI15

11) chain A
residue 508
type SITE
sequence I
description Involved in the release of the transported lipid into the cytosolic leaflet => ECO:0000250|UniProtKB:C7EXK4
source Swiss-Prot : SWS_FT_FI16

12) chain A
residue 560-566
type prosite
sequence XKTGTLT
description ATPASE_E1_E2 E1-E2 ATPases phosphorylation site. DKTGTLT
source prosite : PS00154

13) chain A
residue 512-1012
type TOPO_DOM
sequence VTVELIKYYQAFMIGSDLDLYYEKTDTPTVVRTSSLVEEL
GQIEYIFSXKTGTLTRNIMEFKSCSIAGHCYIDKIPEDKT
ATVEDGIEVGYRKFDDLKKKLNDPSDEDSPIINDFLTLLA
TCHTVIPEFQSDGSIKYQAASPDEGALVQGGADLGYKFII
RKPNSVTVLLEETGEEKEYQLLNICEFNSTRKRMSAIFRF
PDGSIKLFCKGADTVILERLDDEANQYVEATMRHLEDYAS
EGLRTLCLAMRDISEGEYEEWNSIYNEAATTLDNRAEKLD
EAANLIEKNLILIGATAIEDKLQDGVPETIHTLQEAGIKI
WVLTGDRQETAINIGMSCRLLSEDMNLLIINEETRDDTER
NLLEKINALNEHQLSTHDMNTLALVIDGKSLGFALEPELE
DYLLTVAKLCKAVICCRVSPLQKALVVKMVKRKSSSLLLA
IGDGANDVSMIQAAHVGVGISGMEGMQAARSADIAVGQFK
FLKKLLLVHGSWSYQRISVAI
description Cytoplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

14) chain A
residue 1065-1094
type TOPO_DOM
sequence DQFVSSRLLERYPQLYKLGQKGQFFSVYIF
description Cytoplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

15) chain A
residue 1153-1161
type TOPO_DOM
sequence VTNQWTKFT
description Cytoplasmic => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

16) chain A
residue 450-470
type TRANSMEM
sequence ALFTVLIVLILISSIGNVIMS
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

17) chain A
residue 491-511
type TRANSMEM
sequence FFKDFLTFWILFSNLVPISLF
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

18) chain A
residue 1013-1033
type TRANSMEM
sequence LYSFYKNTALYMTQFWYVFAN
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

19) chain A
residue 1044-1064
type TRANSMEM
sequence WTMSFYNLFFTVWPPFVIGVF
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

20) chain A
residue 1095-1115
type TRANSMEM
sequence WGWIINGFFHSAIVFIGTILI
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

21) chain A
residue 1132-1152
type TRANSMEM
sequence WSWGVTVYTTSVIIVLGKAAL
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

22) chain A
residue 1162-1182
type TRANSMEM
sequence LIAIPGSLLFWLIFFPIYASI
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

23) chain A
residue 1203-1223
type TRANSMEM
sequence GVFWLTLIVLPIFALVRDFLW
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

24) chain A
residue 471-490
type TOPO_DOM
sequence TADAKHLSYLYLEGTNKAGL
description Lumenal => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

25) chain A
residue 1034-1043
type TOPO_DOM
sequence AFSGQSIMES
description Lumenal => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

26) chain A
residue 1116-1131
type TOPO_DOM
sequence YRYGFALNMHGELADH
description Lumenal => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

27) chain A
residue 1183-1202
type TOPO_DOM
sequence FPHANISREYYGVVKHTYGS
description Lumenal => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

28) chain A
residue 561
type CARBOHYD
sequence K
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:31243363, ECO:0000269|PubMed:31515475, ECO:0007744|PDB:7OH6, ECO:0007744|PDB:7OH7
source Swiss-Prot : SWS_FT_FI5

29) chain A
residue 562
type CARBOHYD
sequence T
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:31243363, ECO:0000269|PubMed:31515475, ECO:0007744|PDB:7OH6, ECO:0007744|PDB:7OH7
source Swiss-Prot : SWS_FT_FI5

30) chain A
residue 698
type CARBOHYD
sequence F
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:31243363, ECO:0000269|PubMed:31515475, ECO:0007744|PDB:7OH6, ECO:0007744|PDB:7OH7
source Swiss-Prot : SWS_FT_FI5

31) chain A
residue 954
type CARBOHYD
sequence D
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:31243363, ECO:0000269|PubMed:31515475, ECO:0007744|PDB:7OH6, ECO:0007744|PDB:7OH7
source Swiss-Prot : SWS_FT_FI5

32) chain A
residue 957
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:31243363, ECO:0000269|PubMed:31515475, ECO:0007744|PDB:7OH6, ECO:0007744|PDB:7OH7
source Swiss-Prot : SWS_FT_FI5

33) chain A
residue 721
type CARBOHYD
sequence K
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:31243363
source Swiss-Prot : SWS_FT_FI6

34) chain A
residue 755
type CARBOHYD
sequence R
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:31243363
source Swiss-Prot : SWS_FT_FI6

35) chain A
residue 836
type CARBOHYD
sequence G
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:31243363
source Swiss-Prot : SWS_FT_FI6

36) chain A
residue 837
type CARBOHYD
sequence D
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:31243363
source Swiss-Prot : SWS_FT_FI6

37) chain A
residue 928
type CARBOHYD
sequence R
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:31243363
source Swiss-Prot : SWS_FT_FI6

38) chain A
residue 934
type CARBOHYD
sequence K
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:31243363
source Swiss-Prot : SWS_FT_FI6


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