|
eF-site ID
|
6ri5-J |
PDB Code
|
6ri5 |
Chain
|
J |
|
click to enlarge
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Title
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Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles |
Classification
|
RIBOSOME |
Compound
|
25S RNA |
Source
|
ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; |
|
Sequence
|
J: |
SQPVVVIDAKDHLLGRLASTIAKQVLNGQKIVVVRAEALN
ISGEFFRNKLKYHDFLRKATAFNKTRGPFHFRAPSRILYK
AIRGMVSHKTARGKAALERLKIFEGIPPPYDKKKRVVVPQ
ALRVLRLKPGRKYTTLGKLSTSVGWKYEDVVAKLEDKRKV
RSAEYYAKKRAFTKKVSSASAAASESDVAKQLASFGY
|
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Description
|
|
Functional site
|
|
1)
|
chain |
J |
residue |
83-106 |
type |
prosite |
sequence |
IRGMVSHKTARGKAALERLKIFEG
|
description |
RIBOSOMAL_L13 Ribosomal protein L13 signature. IRGMVShktarGKaalerLkIFeG
|
source |
prosite : PS00783
|
|
2)
|
chain |
J |
residue |
185 |
type |
MOD_RES |
sequence |
S
|
description |
Phosphoserine => ECO:0007744|PubMed:17330950, ECO:0007744|PubMed:19779198
|
source |
Swiss-Prot : SWS_FT_FI4
|
|
3)
|
chain |
J |
residue |
187 |
type |
MOD_RES |
sequence |
S
|
description |
Phosphoserine => ECO:0007744|PubMed:17330950, ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
|
source |
Swiss-Prot : SWS_FT_FI5
|
|
4)
|
chain |
J |
residue |
176 |
type |
CROSSLNK |
sequence |
K
|
description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047
|
source |
Swiss-Prot : SWS_FT_FI6
|
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