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eF-site ID
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6r9q-A |
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PDB Code
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6r9q |
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Chain
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A |
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click to enlarge
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Title
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Structure of Saccharomyces cerevisiae apo Pan2 pseudoubiquitin hydrolase-RNA exonuclease (UCH-Exo) module in complex with AACCAA RNA |
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Classification
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HYDROLASE |
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Compound
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PAN2-PAN3 deadenylation complex catalytic subunit PAN2 |
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Source
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(6R9Q) |
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Sequence
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A: |
TSDIQTYTSINKYEVPPAYSRLPLTDNFDFTPFNNTEYSG
LDPDVDNHYTNAIIQLYRFIPEMFNFVVGCLKDENFETTL
LTDLGYLFDMMERSHGKICSSSNFQASLKSLTDKRGEPQE
HLEEYLESLCISESIKRNMPQKFNRFLLSQLIKEEAQTVN
HNITLNQCFGLETEIRTECSCDHYDTTVKLLPSLSISGIN
KTVIKQLNGQNILPYIEYAMKNVTQKNSTETITQECTVKN
LPSVLSLELSLLDTEFSNIRSSKNWLTSEFYGSIIKNKAV
LRSTASELKGTSHIFKYELNGYVAKITDNNNETRLVTYVK
KYNPKENCFKWLMFNDYLVVEITEEEALKMTYPWKTPEII
IYCDAEELRKPFFSVDTYSINYDILFRDYFANGEYKLLTH
DEAPKSGTLVAIDAAFVSLQSELCEIIRSIIRPKRTALAR
ISIIRGEEGELYGVPFVDDYVVNTNHIEDYLTRYSGILPG
DLDPEKSTKRLVRRNVVYRKVWLLMQLGCVFVGHGLNNDF
KHININVPRNQIRDTAIYFLQGKRYLSLRYLAYVLLGMNI
QEGNHDSIEDAHTALILYKKYLHLKEKAIFEKVLNSVYEE
GRAHNFKVPE
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Description
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Functional site
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1)
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chain |
A |
| residue |
660 |
| type |
BINDING |
| sequence |
C
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| description |
BINDING => ECO:0000269|PubMed:24880344, ECO:0007744|PDB:4Q8G
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| source |
Swiss-Prot : SWS_FT_FI1
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2)
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chain |
A |
| residue |
662 |
| type |
BINDING |
| sequence |
H
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| description |
BINDING => ECO:0000269|PubMed:24880344, ECO:0007744|PDB:4Q8G
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| source |
Swiss-Prot : SWS_FT_FI1
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3)
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chain |
A |
| residue |
912 |
| type |
BINDING |
| sequence |
A
|
| description |
BINDING => ECO:0000250|UniProtKB:O95453, ECO:0000255|HAMAP-Rule:MF_03182, ECO:0000305|PubMed:24880344
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| source |
Swiss-Prot : SWS_FT_FI2
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4)
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chain |
A |
| residue |
1071 |
| type |
BINDING |
| sequence |
D
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| description |
BINDING => ECO:0000250|UniProtKB:O95453, ECO:0000255|HAMAP-Rule:MF_03182, ECO:0000305|PubMed:24880344
|
| source |
Swiss-Prot : SWS_FT_FI2
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5)
|
chain |
A |
| residue |
910 |
| type |
BINDING |
| sequence |
D
|
| description |
BINDING => ECO:0000250|UniProtKB:O95453, ECO:0000255|HAMAP-Rule:MF_03182, ECO:0000305|PubMed:24880344
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| source |
Swiss-Prot : SWS_FT_FI2
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6)
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chain |
A |
| residue |
1020 |
| type |
BINDING |
| sequence |
D
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| description |
BINDING => ECO:0000250|UniProtKB:O95453, ECO:0000255|HAMAP-Rule:MF_03182
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| source |
Swiss-Prot : SWS_FT_FI3
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