eF-site ID 6r9m-AB
PDB Code 6r9m
Chain A, B

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Title Structure of Saccharomyces cerevisiae apo Pan2 pseudoubiquitin hydrolase-RNA exonuclease (UCH-Exo) module in complex with AAGGAA RNA
Classification HYDROLASE
Compound PAN2-PAN3 deadenylation complex catalytic subunit PAN2
Source (6R9M)
Sequence A:  TSDIQTYTSINKYEVPPAYSRLPLTSDNFDFTPFNNTEYS
GLDPDVDNHYTNAIIQLYRFIPEMFNFVVGCLKDENFETT
LLTDLGYLFDMMERSHGKICSSSNFQASLKSLTDKREPQE
HLEEYLESLCIESIKRNMPQKFNRFLLSQLIKEEAQTVNH
NITLNQCFGLETEIRTECSCDHYDTTVKLLPSLSISGINK
TVIKQLGQNILPYIEYAMKNVTQKNSTQECTVKNLPSVLS
LELSLLDTEFSNIRSSKNWLTSEFYGSIIKNKAVLRSTAS
ELKGTSHIFKYELNGYVAKITDNNNETRLVTYVKKYNPKE
NCFKWLMFNDYLVVEITEEEALKMTYPWKTPEIIIYCDAE
ELRKPFFSVDTYSINYDILFRDYFANGREYKLLTHDEAPK
SGTLVAIDAAFVSLQSELCEIIRPKRTALARISIIRGEEG
ELYGVPFVDDYVVNTNHIEDYLTRYSGILPGDLDPEKSTK
RLVRRNVVYRKVWLLMQLGCVFVGHGLNNDFKHININVPR
NQIRDTAIYFLQGKRYLSLRYLAYVLLGMNIQEGNHDSIE
DAHTALILYKKYLHLKEKAIFEKVLNSVYEEGRAHNFKVP
B:  GGAA
Description


Functional site

1) chain A
residue 660
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:24880344, ECO:0007744|PDB:4Q8G
source Swiss-Prot : SWS_FT_FI1

2) chain A
residue 662
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:24880344, ECO:0007744|PDB:4Q8G
source Swiss-Prot : SWS_FT_FI1

3) chain A
residue 910
type BINDING
sequence D
description BINDING => ECO:0000250|UniProtKB:O95453, ECO:0000255|HAMAP-Rule:MF_03182, ECO:0000305|PubMed:24880344
source Swiss-Prot : SWS_FT_FI2

4) chain A
residue 912
type BINDING
sequence A
description BINDING => ECO:0000250|UniProtKB:O95453, ECO:0000255|HAMAP-Rule:MF_03182, ECO:0000305|PubMed:24880344
source Swiss-Prot : SWS_FT_FI2

5) chain A
residue 1071
type BINDING
sequence D
description BINDING => ECO:0000250|UniProtKB:O95453, ECO:0000255|HAMAP-Rule:MF_03182, ECO:0000305|PubMed:24880344
source Swiss-Prot : SWS_FT_FI2

6) chain A
residue 1020
type BINDING
sequence D
description BINDING => ECO:0000250|UniProtKB:O95453, ECO:0000255|HAMAP-Rule:MF_03182
source Swiss-Prot : SWS_FT_FI3


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