|
eF-site ID
|
6qzk-A |
PDB Code
|
6qzk |
Chain
|
A |
|
click to enlarge
|
|
Title
|
Structure of Clostridium butyricum Argonaute bound to a guide DNA (5' deoxycytidine) and a 19-mer target DNA |
Classification
|
HYDROLASE |
Compound
|
Clostridium butyricum Argonaute |
Source
|
(6QZK) |
|
Sequence
|
A: |
ANNLTFEAFEGIGQLNELNFYKYRLIGKGQIDNVHQAIWS
VKYKLQANNFFKPVFVKGEILYSLDELKVIPEFENVEVIL
DGNIILSISENTDIYKDVIVFYINNALKNIKDITNYRKYI
TKNTDEIICKSILTTNLKYQYMKSEKGFKLQRKFKISPVV
FRNGKVILYLNCSSDFSTDKSIYEMLNDGLGVVGLQVKNK
WTNANGNIFIEKVLDNTISDPGTSGKLGQSLIDYYINGNQ
KYRVEKFTDEDKNAKVIQAKIKNKTYNYIPQALTPVITRE
YLSHTDKKFSKQIENVIKMDMNYRYQTLKSFVEDIGVIKE
LNNLHFKNQYYTNFDFMGFESGVLEEPVLMGANGKIKDKK
QIFINGFFKNPKENVKFGVLYPEGCMENAQSIARSILDFA
TAGKYNKQENKYISKNLMNIGFKPSECIFESYKLGDITEY
KATARKLKEHEKVGFVIAVIPDMLEVENPYNPFKKVWAKL
NIPSQMITLKTTEKFKNIVDKSGLYYLHNIALNILGKIGG
IPWIIKDMPGNIDCFIGLAVGTREKGIHFPACSVLFDKYG
KLINYYKPTIPQSGEKIAETILQEIFDNVLISYKEENGEY
PKNIVIHRAGFSRENIDWYKEYFDKKGIKFNIIEVKKNIP
VKIAKVVGSNICNPIKGSYVLKNDKAFIVTTDIKDGVASP
NPLKIEKTYGDVEMKSILEQIYSLSQIHVGSTKSLRLPIT
TGYADKICKAIEYIPQGVVDNRLFFL
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
515 |
type |
|
sequence |
N
|
description |
binding site for residue MG A 801
|
source |
: AC1
|
|
2)
|
chain |
A |
residue |
519 |
type |
|
sequence |
K
|
description |
binding site for residue MG A 801
|
source |
: AC1
|
|
3)
|
chain |
A |
residue |
748 |
type |
|
sequence |
L
|
description |
binding site for residue MG A 801
|
source |
: AC1
|
|
4)
|
chain |
A |
residue |
64 |
type |
|
sequence |
L
|
description |
binding site for residue FMT A 802
|
source |
: AC2
|
|
5)
|
chain |
A |
residue |
65 |
type |
|
sequence |
D
|
description |
binding site for residue FMT A 802
|
source |
: AC2
|
|
6)
|
chain |
A |
residue |
627 |
type |
|
sequence |
K
|
description |
binding site for residue FMT A 803
|
source |
: AC3
|
|
|
|