eF-site ID 6qzk-A
PDB Code 6qzk
Chain A

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Title Structure of Clostridium butyricum Argonaute bound to a guide DNA (5' deoxycytidine) and a 19-mer target DNA
Classification HYDROLASE
Compound Clostridium butyricum Argonaute
Source (6QZK)
Sequence A:  ANNLTFEAFEGIGQLNELNFYKYRLIGKGQIDNVHQAIWS
VKYKLQANNFFKPVFVKGEILYSLDELKVIPEFENVEVIL
DGNIILSISENTDIYKDVIVFYINNALKNIKDITNYRKYI
TKNTDEIICKSILTTNLKYQYMKSEKGFKLQRKFKISPVV
FRNGKVILYLNCSSDFSTDKSIYEMLNDGLGVVGLQVKNK
WTNANGNIFIEKVLDNTISDPGTSGKLGQSLIDYYINGNQ
KYRVEKFTDEDKNAKVIQAKIKNKTYNYIPQALTPVITRE
YLSHTDKKFSKQIENVIKMDMNYRYQTLKSFVEDIGVIKE
LNNLHFKNQYYTNFDFMGFESGVLEEPVLMGANGKIKDKK
QIFINGFFKNPKENVKFGVLYPEGCMENAQSIARSILDFA
TAGKYNKQENKYISKNLMNIGFKPSECIFESYKLGDITEY
KATARKLKEHEKVGFVIAVIPDMLEVENPYNPFKKVWAKL
NIPSQMITLKTTEKFKNIVDKSGLYYLHNIALNILGKIGG
IPWIIKDMPGNIDCFIGLAVGTREKGIHFPACSVLFDKYG
KLINYYKPTIPQSGEKIAETILQEIFDNVLISYKEENGEY
PKNIVIHRAGFSRENIDWYKEYFDKKGIKFNIIEVKKNIP
VKIAKVVGSNICNPIKGSYVLKNDKAFIVTTDIKDGVASP
NPLKIEKTYGDVEMKSILEQIYSLSQIHVGSTKSLRLPIT
TGYADKICKAIEYIPQGVVDNRLFFL
Description


Functional site

1) chain A
residue 515
type
sequence N
description binding site for residue MG A 801
source : AC1

2) chain A
residue 519
type
sequence K
description binding site for residue MG A 801
source : AC1

3) chain A
residue 748
type
sequence L
description binding site for residue MG A 801
source : AC1

4) chain A
residue 64
type
sequence L
description binding site for residue FMT A 802
source : AC2

5) chain A
residue 65
type
sequence D
description binding site for residue FMT A 802
source : AC2

6) chain A
residue 627
type
sequence K
description binding site for residue FMT A 803
source : AC3


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