eF-site ID 6qx1-B
PDB Code 6qx1
Chain B

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Title 2.7A structure of benzoisoxazole 3 with S.aureus DNA gyrase and DNA.
Classification ISOMERASE
Compound DNA gyrase subunit B
Source (6QX1)
Sequence B:  KLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILP
LRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGDFDLA
KARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGY
VYIAQPPTGYKGLGEMNADQLWETTMNPEHRALLQVKLED
AIEADQTFEMLMGDVVENRRQFIEDNAVY
Description


Functional site

1) chain B
residue 508
type
sequence D
description binding site for residue MN B 701
source : AC1

2) chain B
residue 510
type
sequence D
description binding site for residue MN B 701
source : AC1

3) chain B
residue 630
type
sequence R
description binding site for residue JK8 B 702
source : AC2

4) chain B
residue 633
type
sequence I
description binding site for residue JK8 B 702
source : AC2

5) chain B
residue 634
type
sequence E
description binding site for residue JK8 B 702
source : AC2

6) chain B
residue 637
type
sequence A
description binding site for residue JK8 B 702
source : AC2

7) chain B
residue 433-441
type prosite
sequence LVEGDSAGG
description TOPOISOMERASE_II DNA topoisomerase II signature. LVEGDSAGG
source prosite : PS00177

8) chain B
residue 510
type ACT_SITE
sequence D
description O-(5'-phospho-DNA)-tyrosine intermediate => ECO:0000255|HAMAP-Rule:MF_01897
source Swiss-Prot : SWS_FT_FI1

9) chain B
residue 460
type SITE
sequence K
description Interaction with DNA => ECO:0000255|HAMAP-Rule:MF_01898
source Swiss-Prot : SWS_FT_FI2

10) chain B
residue 463
type SITE
sequence N
description Interaction with DNA => ECO:0000255|HAMAP-Rule:MF_01898
source Swiss-Prot : SWS_FT_FI2


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