eF-site ID 6qtp-B PDB Code 6qtp Chain B click to enlarge Title 2.37A structure of gepotidacin with S.aureus DNA gyrase and uncleaved DNA Classification ISOMERASE Compound DNA gyrase subunit B,DNA gyrase subunit B Source (6QTP) Sequence B:  GKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQAIL PLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGDFDL AKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAG YVYIAQPPYKGLGEMNADQLWETTMNPEHRALLQVKLEDA IEADQTFEMLMGDVVENRRQFIEDNAVYA Description (1)  DNA gyrase subunit B,DNA gyrase subunit B, DNA gyrase subunit A/DNA Complex Functional site 1) chain B residue 435 type sequence E description binding site for residue MN B 701 source : AC1 2) chain B residue 508 type sequence D description binding site for residue MN B 701 source : AC1 3) chain B residue 510 type sequence D description binding site for residue MN B 701 source : AC1 4) chain B residue 427 type sequence E description binding site for residue NA B 702 source : AC2 5) chain B residue 428 type sequence E description binding site for residue NA B 702 source : AC2 6) chain B residue 460 type SITE sequence K description Interaction with DNA => ECO:0000255|HAMAP-Rule:MF_01898 source Swiss-Prot : SWS_FT_FI2 7) chain B residue 463 type SITE sequence N description Interaction with DNA => ECO:0000255|HAMAP-Rule:MF_01898 source Swiss-Prot : SWS_FT_FI2 8) chain B residue 433-441 type prosite sequence LVEGDSAGG description TOPOISOMERASE_II DNA topoisomerase II signature. LVEGDSAGG source prosite : PS00177 9) chain B residue 510 type ACT_SITE sequence D description O-(5'-phospho-DNA)-tyrosine intermediate => ECO:0000255|HAMAP-Rule:MF_01897 source Swiss-Prot : SWS_FT_FI1

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