eF-site ID 6qto-A
PDB Code 6qto
Chain A

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Title Crystal structure of an Arabidopsis WD40 domain in complex with a transcription factor
Classification PLANT PROTEIN
Compound E3 ubiquitin-protein ligase COP1
Source (HY5_ARATH)
Sequence A:  MTFTRYSRLRVIAEIRNIVSSIEFDRDDELFATAGVSRXI
KVFDFSSVVNEPQCPIVEMSTRSKLSXLSWNKHEKNHIAS
SDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSM
LVSGSDDCKVKVWXTRQEASVINIDMKANICXVKYNPGSS
NYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFL
SNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGL
TVNSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDA
EEEAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA
Description


Functional site

1) chain A
residue 430
type
sequence K
description binding site for residue SO4 A 701
source : AC1

2) chain A
residue 473
type
sequence R
description binding site for residue SO4 A 701
source : AC1

3) chain A
residue 512
type
sequence K
description binding site for residue SO4 A 701
source : AC1

4) chain A
residue 492
type
sequence X
description binding site for residue SO4 A 702
source : AC2

5) chain A
residue 494
type
sequence R
description binding site for residue SO4 A 702
source : AC2

6) chain A
residue 561
type
sequence N
description binding site for residue SO4 A 702
source : AC2

7) chain A
residue 578
type
sequence K
description binding site for residue SO4 A 702
source : AC2

8) chain A
residue 494
type
sequence R
description binding site for residue GOL A 703
source : AC3

9) chain A
residue 520
type
sequence Y
description binding site for residue GOL A 703
source : AC3

10) chain A
residue 532
type
sequence Y
description binding site for residue GOL A 703
source : AC3

11) chain A
residue 577
type
sequence V
description binding site for residue GOL A 703
source : AC3

12) chain A
residue 578
type
sequence K
description binding site for residue GOL A 703
source : AC3

13) chain A
residue 475
type
sequence E
description binding site for residue GOL A 704
source : AC4

14) chain A
residue 476
type
sequence P
description binding site for residue GOL A 704
source : AC4

15) chain A
residue 477
type
sequence S
description binding site for residue GOL A 704
source : AC4

16) chain A
residue 494
type
sequence R
description binding site for residue GOL A 704
source : AC4

17) chain A
residue 578
type
sequence K
description binding site for residue GOL A 704
source : AC4

18) chain A
residue 549
type
sequence K
description binding site for residue GOL A 705
source : AC5

19) chain A
residue 573
type
sequence R
description binding site for residue GOL A 705
source : AC5

20) chain A
residue 585
type
sequence T
description binding site for residue GOL A 705
source : AC5

21) chain A
residue 587
type
sequence R
description binding site for residue GOL A 705
source : AC5

22) chain A
residue 627
type
sequence S
description binding site for residue GOL A 705
source : AC5

23) chain A
residue 628
type
sequence H
description binding site for residue GOL A 705
source : AC5

24) chain A
residue 629
type
sequence R
description binding site for residue GOL A 705
source : AC5

25) chain A
residue 632
type
sequence S
description binding site for residue GOL A 705
source : AC5

26) chain A
residue 422
type SITE
sequence K
description Human TRIB1 COP1-binding motif => ECO:0000269|PubMed:27041596
source Swiss-Prot : SWS_FT_FI1

27) chain A
residue 441
type SITE
sequence Y
description Human TRIB1 COP1-binding motif => ECO:0000269|PubMed:27041596
source Swiss-Prot : SWS_FT_FI1

28) chain A
residue 563-577
type prosite
sequence LASASTDSTLRLWDV
description WD_REPEATS_1 Trp-Asp (WD) repeats signature. LASAstDsTLRLWDV
source prosite : PS00678


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