eF-site ID 6qkl-ABCDEFGHIJ PDB Code 6qkl Chain A, B, C, D, E, F, G, H, I, J click to enlarge Title Mechanism of eIF6 release from the nascent 60S ribosomal subunit Classification RIBOSOME Compound 26S RIBOSOMAL RNA Source ORGANISM_SCIENTIFIC: Dictyostelium discoideum; ORGANISM_COMMON: Slime mold; Sequence A:  SHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKV HLTAFMGYKAGMTHVVRDLEKPGSKMHKKEIVEAVTIIEC PPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYKN WYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVV RVIAHTQVHKLKLTQKKAHVLEIQVNGGSIVEKVNFAVAN FEKTVNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVRKL PRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVER NKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAH YGMVKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEK ITLKFIDTSSKFGHGLHQTAEDKTKYFG B:  MKVINSSRKVQIPENVTVDVKGRSVKVTGPRGTLSKSFDH ASVDINLVGKKELTVDLWFGNRKQIACIKTITSIIENMIT GVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKI VRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQ LRSAIKYKDVRKFLDGIYVSERNVL C:  MSGAGSKRKNVFIEKATKLFTTYDKMIVAEADFVGSSQLQ KIRKSIRGIGAVLMGKKTMIRKVIRDLADSKPELDALNTY LKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDV IIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHII KTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYSP SISEE D:  MPPKVDPSEKVEVFLRVCGGEAGAMSTLAPKLGPLGVSPK KVGDDIAKATQPWKGMKVSVKLTIQNRIAVPEVLPSASAL VIKALKEPPRDRKKEKNIKHNGNIPLEEICKIAKTMRFKS LAVDFKGSVLEILGTAHSVGCKVNGKSPRDIQAGIQSGEI EVVEPK E:  SNYRVSLGLPVGAVMNSADNSGAKNLYVIAVKGIKGRLNR LPSAGVGDMVMATVKKGKPELRKKVCTGLVVRQRKHWKRK DGVYIYFEDNAGVMCNPKGEVKGNILGPVAKECSDLWPKV ATNAGTIV F:  GRRPARCYRYCKNKPYIKSRYCRGVPDAKIRIFDLGRKKA STDEFPLCVHLISLEKEQLSSEAIEAGRISCNKYISKTGG KDSFHMRVRVHPWHVLRINKMLSCAGADRLQTGMRGAFGK PMGTVARVNIGQIIFSIRTRDNMLANVVEALRRSSYKFPG RQKIVVSKKWGFTAYNREAYQKLKADGRLMNDGANVKVIT NHGTLAQYAKDIAAAN G:  TSLCNYSEFKIYPARGMKFVRGDSKVFHFINTKVESLFFR KINPRDIRWSMVY H:  IEPSLVILARKYKCDKMICRKCYARLHPRAVNCRKKKCGH SNNLRPKKKLL I:  MATRLQYENSCDVGVFLKLTNKYCLVGQCGSKQFLHTVEN RLADHIPVVETSIAGTRIVGRLSAGNKNGLLLPNTCTDQE LQQIRNSLPDDVVVQRIEEKFSALGNCIATNDYVALVHPD IDRETEEIIADVLGVEVFRQTVSGNVLVGTYCALTNQGAL VHPMTSIADQDELSSLLQVPLVAGTVNRGNECVAAGCVVN DWTAIVGADTTATEISVIESIFAL J:  MSIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWR SGVEKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFGTDDQ TEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCV NPETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQ LKEKMKIERAHMRLRFILPVNEGKKLKEKLKPLIKVIESE DYGQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLK DVEEGDEKFE Description (1)  60S ribosomal protein L3, 60S ribosomal protein L9, 60S ribosomal protein L23, 60S ribosomal protein L10, 60S ribosomal protein L24, Ubiquitin-60S ribosomal protein L40, Eukaryotic translation initiation factor 6, Ribosome maturation protein SBDS, 60S acidic ribosomal protein P0, 60S ribosomal protein L12/RNA Complex Functional site 1) chain J residue 44-63 type prosite sequence EKDLDEVLQTHSVFVNVSKG description UPF0023 Uncharacterized protein family UPF0023 signature. EkdLDEVLqthsVFvnvsKG source prosite : PS01267 2) chain B residue 161-182 type prosite sequence LRSAIKYKDVRKFLDGIYVSER description RIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. LrsaIkyKdvRkFlDGIYVseR source prosite : PS00700 3) chain F residue 108-129 type prosite sequence ADRLQTGMRGAFGKPMGTVARV description RIBOSOMAL_L10E Ribosomal protein L10e signature. ADRlqtGMRgAFGKPmGtvARV source prosite : PS01257 4) chain G residue 8-25 type prosite sequence YSEFKIYPARGMKFVRGD description RIBOSOMAL_L24E Ribosomal protein L24e signature. YsEfkIyPArGmkFvRgD source prosite : PS01073 5) chain A residue 212-235 type prosite sequence FAENELIDVIGVTKGKGFNGVIKR description RIBOSOMAL_L3 Ribosomal protein L3 signature. FaeneliDviGvTkGKGfnGvikR source prosite : PS00474 6) chain J residue 2 type MOD_RES sequence S description N-acetylserine => ECO:0000269|Ref.6, ECO:0007744|PubMed:22223895, ECO:0007744|PubMed:22814378 source Swiss-Prot : SWS_FT_FI1

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