eF-site ID 6qk7-C
PDB Code 6qk7
Chain C

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Title Elongator catalytic subcomplex Elp123 lobe
Classification TRANSLATION
Compound Elongator complex protein 1
Source ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae (strain ATCC 204508 / S288c);
Sequence C:  SGIAVVAVMCKPHRCPHIAYTGNICVYCPGGPDSDFEYST
QSYTGYEPTSMRAIRARYDPYEQARGRVEQLKQLGHSIDK
VEYVLMGGTFMSLPKEYREDFIVKLHNALSGFNGNDIDEA
ILYSQQSLTKCVGITIETRPDYCTQTHLDDMLKYGCTRLE
IGVQSLYEDVARDTNRGHTVRSVCETFAVSKDAGYKVVSH
MMPDLPNVGMERDIEQFKEYFENPDFRTDGLKIYPTLVIR
GTGLYELWKTGRYKSYSANALVDLVARILALVPPWTRIYR
VQRDIPMPLVTSGVDNGNLRELALARMKDLGTTCRDVRTR
EVGVQPDQVELIRRDYYANGGWETFLSYEDPKKDILIGLL
RLRKASKKYTYRKEFTSQRTSIVRELHVYGQHQGFGTLLM
EEAERIAKEEHGSEKISVISGVGVRNYYGKLGYELDGPYM
SKRI
Description (1)  Elongator complex protein 1, Elongator complex protein 2, Elongator complex protein 3 (E.C.2.3.1.48)


Functional site

1) chain C
residue 108
type
sequence C
description binding site for residue SF4 C 601
source : AC1

2) chain C
residue 110
type
sequence H
description binding site for residue SF4 C 601
source : AC1

3) chain C
residue 118
type
sequence C
description binding site for residue SF4 C 601
source : AC1

4) chain C
residue 121
type
sequence C
description binding site for residue SF4 C 601
source : AC1

5) chain C
residue 269
type
sequence R
description binding site for residue SF4 C 601
source : AC1

6) chain C
residue 120
type
sequence Y
description binding site for residue 5AD C 602
source : AC2

7) chain C
residue 257
type
sequence Q
description binding site for residue 5AD C 602
source : AC2

8) chain C
residue 293
type
sequence H
description binding site for residue 5AD C 602
source : AC2

9) chain C
residue 295
type
sequence M
description binding site for residue 5AD C 602
source : AC2

10) chain C
residue 327
type
sequence Y
description binding site for residue 5AD C 602
source : AC2

11) chain C
residue 328
type
sequence P
description binding site for residue 5AD C 602
source : AC2

12) chain C
residue 330
type
sequence L
description binding site for residue 5AD C 602
source : AC2

13) chain C
residue 376
type
sequence R
description binding site for residue 5AD C 602
source : AC2

14) chain C
residue 108
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:16420352, ECO:0000269|PubMed:31309145, ECO:0007744|PDB:6QK7
source Swiss-Prot : SWS_FT_FI1

15) chain C
residue 118
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:16420352, ECO:0000269|PubMed:31309145, ECO:0007744|PDB:6QK7
source Swiss-Prot : SWS_FT_FI1

16) chain C
residue 121
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:16420352, ECO:0000269|PubMed:31309145, ECO:0007744|PDB:6QK7
source Swiss-Prot : SWS_FT_FI1

17) chain C
residue 453
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:12872131
source Swiss-Prot : SWS_FT_FI3

18) chain C
residue 173
type BINDING
sequence K
description BINDING => ECO:0000250|UniProtKB:A0A1C7D1B7
source Swiss-Prot : SWS_FT_FI2

19) chain C
residue 485
type BINDING
sequence E
description BINDING => ECO:0000250|UniProtKB:A0A1C7D1B7
source Swiss-Prot : SWS_FT_FI2

20) chain C
residue 508
type BINDING
sequence F
description BINDING => ECO:0000250|UniProtKB:A0A1C7D1B7
source Swiss-Prot : SWS_FT_FI2

21) chain C
residue 541
type BINDING
sequence Y
description BINDING => ECO:0000250|UniProtKB:A0A1C7D1B7
source Swiss-Prot : SWS_FT_FI2


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