eF-site ID 6qgl-AB
PDB Code 6qgl
Chain A, B

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Title Crystal structure of VP5 from Haloarchaeal pleomorphic virus 6
Classification VIRAL PROTEIN
Compound VP5
Source (H9ABP6_9VIRU)
Sequence A:  AIGAAAISAVGGIGVGWTLREFEVVGSDDPAEGLTPDVLR
NQLSDSVVKRKSNNQSTMVDNQNILDGVEHTAYTEAKIAA
IEELNAGSSESAVLSAANSAIDSYETTVRTNFYKSWNETV
RELEAMTQTVIAHADVGLSYITDFGDPRFGNLASGTSPNT
LKDTTVSMPDGTNFTLLTFRHNTGWDSGNAAYSVVEYNPK
EVVTSTNSNTYNTVDGTQYMKFSEWNAVETEMDTVFQNVR
NGISTWVTNVYGDVQSGAIEISDLVTPRERATMMAQEEGM
SQAIADLIALNVPVDAEREATITIQDTGATLPGTFALTDS
SDGPLSAGQTYDPSTFSGDVYFTADMSLVEGPWDAINSGV
DGGTITITSEPYEGTAIEVTTVESETVSVPAADWTDNGDG
TWSYDASGDLETTITNVDSARFVSTATETTYDTLQLKGAF
TVDKLVNKQSGEEVSSTSFTSSEPQTDSNYITQDEWDQLE
QQNKELIEKYE
B:  EGLTPDVLRNQLSDSVVKRKSNNQSTMVDNQNILDGVEHT
AYTEAKIAAIEELNAGSSESAVLSAANSAIDSYETTVRTN
FYKSWNETVRELEAMTQTVIAHADVGLSYITDFGDPRFGN
LASGTSPNTLKDTTVSMPDGTNFTLLTFRHNTGWDSGNAA
YSVVEYNPKEVVTSTNSNTYNTVDGTQYMKFSEWNAVETE
MDTVFQNVRNGISTWVTNVYGDQNKELIE
Description (1)  VP5


Functional site

1) chain A
residue 61
type
sequence N
description binding site for residue BR A 601
source : AC1

2) chain A
residue 227
type
sequence M
description binding site for residue BR A 601
source : AC1

3) chain A
residue 232
type
sequence W
description binding site for residue BR A 601
source : AC1

4) chain A
residue 217
type
sequence T
description binding site for residue BR A 602
source : AC2

5) chain A
residue 229
type
sequence F
description binding site for residue BR A 602
source : AC2

6) chain A
residue 230
type
sequence S
description binding site for residue BR A 602
source : AC2

7) chain A
residue 47
type
sequence R
description binding site for residue BR A 603
source : AC3

8) chain A
residue 144
type
sequence G
description binding site for residue BR A 603
source : AC3

9) chain A
residue 42
type
sequence T
description binding site for residue BR A 604
source : AC4

10) chain A
residue 300
type
sequence P
description binding site for residue BR A 605
source : AC5

11) chain A
residue 468
type
sequence S
description binding site for residue BR A 605
source : AC5

12) chain A
residue 124
type
sequence N
description binding site for residue BR A 606
source : AC6

13) chain A
residue 128
type
sequence R
description binding site for residue BR A 606
source : AC6

14) chain A
residue 273
type
sequence T
description binding site for residue BR A 607
source : AC7

15) chain A
residue 275
type
sequence R
description binding site for residue BR A 607
source : AC7

16) chain A
residue 157
type
sequence G
description binding site for residue BR A 608
source : AC8

17) chain B
residue 47
type
sequence R
description binding site for residue BR A 608
source : AC8

18) chain A
residue 193
type
sequence D
description binding site for residue BR A 609
source : AC9

19) chain A
residue 196
type
sequence N
description binding site for residue BR A 609
source : AC9

20) chain A
residue 187
type
sequence R
description binding site for residue BR A 610
source : AD1

21) chain A
residue 298
type
sequence N
description binding site for residue BR A 611
source : AD2

22) chain A
residue 92
type
sequence N
description binding site for residue BR A 612
source : AD3

23) chain B
residue 61
type
sequence N
description binding site for residue BR B 601
source : AD4

24) chain B
residue 227
type
sequence M
description binding site for residue BR B 601
source : AD4

25) chain B
residue 232
type
sequence W
description binding site for residue BR B 601
source : AD4

26) chain B
residue 217
type
sequence T
description binding site for residue BR B 602
source : AD5

27) chain B
residue 229
type
sequence F
description binding site for residue BR B 602
source : AD5

28) chain B
residue 230
type
sequence S
description binding site for residue BR B 602
source : AD5

29) chain B
residue 47
type
sequence R
description binding site for residue BR B 603
source : AD6

30) chain B
residue 144
type
sequence G
description binding site for residue BR B 603
source : AD6

31) chain B
residue 145
type
sequence L
description binding site for residue BR B 604
source : AD7

32) chain B
residue 193
type
sequence D
description binding site for residue BR B 605
source : AD8

33) chain B
residue 196
type
sequence N
description binding site for residue BR B 605
source : AD8

34) chain B
residue 121
type
sequence K
description binding site for residue BR B 606
source : AD9

35) chain B
residue 124
type
sequence N
description binding site for residue BR B 606
source : AD9

36) chain B
residue 128
type
sequence R
description binding site for residue BR B 606
source : AD9

37) chain B
residue 155
type
sequence R
description binding site for residue BR B 607
source : AE1

38) chain B
residue 157
type
sequence G
description binding site for residue BR B 607
source : AE1

39) chain A
residue 47
type
sequence R
description binding site for residue BR B 608
source : AE2

40) chain B
residue 187
type
sequence R
description binding site for residue BR B 609
source : AE3

41) chain B
residue 189
type
sequence N
description binding site for residue BR B 609
source : AE3

42) chain B
residue 214
type
sequence N
description binding site for residue BR B 610
source : AE4

43) chain B
residue 58
type
sequence K
description binding site for residue BR B 611
source : AE5

44) chain B
residue 225
type
sequence Q
description binding site for residue BR B 611
source : AE5


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