eF-site ID 6qcz-C
PDB Code 6qcz
Chain C

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Title MloK1 model from single particle analysis of 2D crystals, class 3 (intermediate extended conformation)
Classification MEMBRANE PROTEIN
Compound Cyclic nucleotide-gated potassium channel mll3241
Source (CNGK1_RHILO)
Sequence C:  MSVLPFLRIYAPLNAVLAAPGLLAVAALTIPDMSGRSRLA
LAALLAVIWGAYLLQLAATLLKRRAGVVRDRTPKIAIDVL
AVLVPLAAFLLDGSPDWSLYCAVWLLKPLRDSTFFPVLGR
VLANEARNLIGVTTLFGVVLFAVALAAYVIERDIQPEKFG
SIPQAMWWAVVTLSTTGYGDTIPQSFAGRVLAGAVMMSGI
GIFGLWAGILATGFYQEVRRGDFVRNWQLVAAVPLFQKLG
PAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSV
SVATPNPVELGPGAFFGEMALISGEPRSATVSAATTVSLL
SLHSADFQMLCSSSPEIAEIFRKTALERRGAAASA
Description (1)  Cyclic nucleotide-gated potassium channel mll3241


Functional site

1) chain C
residue 175
type
sequence T
description binding site for residue K A 401
source : AC1

2) chain C
residue 176
type
sequence T
description binding site for residue K A 401
source : AC1

3) chain C
residue 177
type
sequence G
description binding site for residue K D 401
source : AC2

4) chain C
residue 178
type
sequence Y
description binding site for residue K D 401
source : AC2

5) chain C
residue 297
type BINDING
sequence G
description BINDING => ECO:0007744|PDB:1VP6
source Swiss-Prot : SWS_FT_FI10

6) chain C
residue 307
type BINDING
sequence R
description BINDING => ECO:0007744|PDB:1VP6
source Swiss-Prot : SWS_FT_FI10

7) chain C
residue 348
type BINDING
sequence R
description BINDING => ECO:0007744|PDB:1VP6
source Swiss-Prot : SWS_FT_FI10

8) chain C
residue 62-74
type TOPO_DOM
sequence KRRAGVVRDRTPK
description Cytoplasmic
source Swiss-Prot : SWS_FT_FI1

9) chain C
residue 113-129
type TOPO_DOM
sequence TFFPVLGRVLANEARNL
description Cytoplasmic
source Swiss-Prot : SWS_FT_FI1

10) chain C
residue 211-355
type TOPO_DOM
sequence ATGFYQEVRRGDFVRNWQLVAAVPLFQKLGPAVLVEIVRA
LRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVEL
GPGAFFGEMALISGEPRSATVSAATTVSLLSLHSADFQML
CSSSPEIAEIFRKTALERRGAAASA
description Cytoplasmic
source Swiss-Prot : SWS_FT_FI1

11) chain C
residue 1-12
type TOPO_DOM
sequence MSVLPFLRIYAP
description Cytoplasmic
source Swiss-Prot : SWS_FT_FI1

12) chain C
residue 13-30
type TRANSMEM
sequence LNAVLAAPGLLAVAALTI
description Helical; Name=Segment S1
source Swiss-Prot : SWS_FT_FI2

13) chain C
residue 31-38
type TOPO_DOM
sequence PDMSGRSR
description Periplasmic
source Swiss-Prot : SWS_FT_FI3

14) chain C
residue 151-161
type TOPO_DOM
sequence ERDIQPEKFGS
description Periplasmic
source Swiss-Prot : SWS_FT_FI3

15) chain C
residue 181-185
type TOPO_DOM
sequence TIPQS
description Periplasmic
source Swiss-Prot : SWS_FT_FI3

16) chain C
residue 39-61
type TRANSMEM
sequence LALAALLAVIWGAYLLQLAATLL
description Helical; Name=Segment S2
source Swiss-Prot : SWS_FT_FI4

17) chain C
residue 75-94
type TRANSMEM
sequence IAIDVLAVLVPLAAFLLDGS
description Helical; Name=Segment S3
source Swiss-Prot : SWS_FT_FI5

18) chain C
residue 95-112
type TRANSMEM
sequence PDWSLYCAVWLLKPLRDS
description Helical; Name=Segment S4
source Swiss-Prot : SWS_FT_FI6

19) chain C
residue 130-150
type TRANSMEM
sequence IGVTTLFGVVLFAVALAAYVI
description Helical; Name=Segment S5
source Swiss-Prot : SWS_FT_FI7

20) chain C
residue 162-180
type INTRAMEM
sequence IPQAMWWAVVTLSTTGYGD
description Pore-forming
source Swiss-Prot : SWS_FT_FI8

21) chain C
residue 186-210
type TRANSMEM
sequence FAGRVLAGAVMMSGIGIFGLWAGIL
description Helical; Name=Segment S6
source Swiss-Prot : SWS_FT_FI9


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