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eF-site ID
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6qc9-.S1 |
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PDB Code
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6qc9 |
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Chain
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S1 |
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Title
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Ovine respiratory complex I FRC open class 4 |
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Classification
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ELECTRON TRANSPORT |
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Compound
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NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial |
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Source
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ORGANISM_COMMON: Sheep; ORGANISM_SCIENTIFIC: Ovis aries; |
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Sequence
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S1: |
SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHER
LSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEK
TKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGS
DRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASE
IAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPV
GALTSKPYAFTARPWETRKTESIDVMDAVGSNIVVSTRTG
EVMRILPRMHEDINEEWISDKTRFAYDGLKRQRLTEPMVR
NEKGLLTHTTWEDALSRVAGMLQSCQGNDVAAIAGGLVDA
EALIALKDLLNRVDSDTLCTEEVFPTAGAGTDLRSNYLLN
TTIAGVEEADVVLLVGTNPRFEAPLFNARIRKSWLHNDLK
VALIGSPVDLTYRYDHLGDSPKILQDIASGSHPFSQVLQE
AKKPMVVLGSSALQRNDGAAILAAVSNIAQKIRTSSGVTG
DWKVMNILHRIASQVAALDLGYKPGVEAIRKNPPKMLFLL
GADGGCVTRQDLPKDCFIVYQGHHGDVGAPIADVILPGAA
YTEKSATYVNTEGRAQQTKVAVMPPGLAREDWKIIRALSE
IAGMTLPYDTLDQVRNRLEEVSPNLVRYDDVEGANYFQQA
SELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMA
KCVKAVTE
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Description
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(1) |
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (E.C.1.6.99.3,7.1.1.2), NDUFV2, NADH:ubiquinone oxidoreductase core subunit S1, NDUFS2, NADH:ubiquinone oxidoreductase core subunit S3, NDUFS7, NDUFS8, NDUFV3, NDUFS6, NADH:ubiquinone oxidoreductase subunit S4, NADH:ubiquinone oxidoreductase subunit A9, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, NDUFA5, NADH:ubiquinone oxidoreductase subunit A6, NDUFA7, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, Acyl carrier protein, NADH-ubiquinone oxidoreductase chain 3 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 1 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 6 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 4L (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 5 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 4 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 2 (E.C.7.1.1.2), NDUFA11, NADH:ubiquinone oxidoreductase subunit B5, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8, NDUFB10, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial, NADH:ubiquinone oxidoreductase subunit S5, NADH:ubiquinone oxidoreductase subunit A3, NADH:ubiquinone oxidoreductase subunit B3, NADH dehydrogenase [ubiquinone] 1 subunit C2, NADH:ubiquinone oxidoreductase subunit B4, NDUFA13, Uncharacterized protein, NADH:ubiquinone oxidoreductase subunit B7, NADH:ubiquinone oxidoreductase subunit B9, NADH:ubiquinone oxidoreductase subunit B2, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial, NDUFB11, NDUFC1, NDUFB1, NDUFA1
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Functional site
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1)
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chain |
S1 |
| residue |
105 |
| type |
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| sequence |
C
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| description |
binding site for residue SF4 S1 801
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| source |
: AC4
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2)
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chain |
S1 |
| residue |
108 |
| type |
|
| sequence |
C
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| description |
binding site for residue SF4 S1 801
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| source |
: AC4
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3)
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chain |
S1 |
| residue |
110 |
| type |
|
| sequence |
Q
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| description |
binding site for residue SF4 S1 801
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| source |
: AC4
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4)
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chain |
S1 |
| residue |
114 |
| type |
|
| sequence |
C
|
| description |
binding site for residue SF4 S1 801
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| source |
: AC4
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5)
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chain |
S1 |
| residue |
205 |
| type |
|
| sequence |
V
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| description |
binding site for residue SF4 S1 801
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| source |
: AC4
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6)
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chain |
S1 |
| residue |
206 |
| type |
|
| sequence |
G
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| description |
binding site for residue SF4 S1 801
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| source |
: AC4
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7)
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chain |
S1 |
| residue |
153 |
| type |
|
| sequence |
C
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| description |
binding site for residue SF4 S1 802
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| source |
: AC5
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8)
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chain |
S1 |
| residue |
154 |
| type |
|
| sequence |
I
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| description |
binding site for residue SF4 S1 802
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| source |
: AC5
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9)
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chain |
S1 |
| residue |
156 |
| type |
|
| sequence |
C
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| description |
binding site for residue SF4 S1 802
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| source |
: AC5
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10)
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chain |
S1 |
| residue |
157 |
| type |
|
| sequence |
T
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| description |
binding site for residue SF4 S1 802
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| source |
: AC5
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11)
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chain |
S1 |
| residue |
159 |
| type |
|
| sequence |
C
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| description |
binding site for residue SF4 S1 802
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| source |
: AC5
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12)
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chain |
S1 |
| residue |
203 |
| type |
|
| sequence |
C
|
| description |
binding site for residue SF4 S1 802
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| source |
: AC5
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13)
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chain |
S1 |
| residue |
41 |
| type |
|
| sequence |
C
|
| description |
binding site for residue FES S1 803
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| source |
: AC6
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14)
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chain |
S1 |
| residue |
42 |
| type |
|
| sequence |
Y
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| description |
binding site for residue FES S1 803
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| source |
: AC6
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15)
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chain |
S1 |
| residue |
50 |
| type |
|
| sequence |
G
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| description |
binding site for residue FES S1 803
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| source |
: AC6
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16)
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chain |
S1 |
| residue |
52 |
| type |
|
| sequence |
C
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| description |
binding site for residue FES S1 803
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| source |
: AC6
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17)
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chain |
S1 |
| residue |
53 |
| type |
|
| sequence |
R
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| description |
binding site for residue FES S1 803
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| source |
: AC6
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18)
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chain |
S1 |
| residue |
55 |
| type |
|
| sequence |
C
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| description |
binding site for residue FES S1 803
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| source |
: AC6
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19)
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chain |
S1 |
| residue |
69 |
| type |
|
| sequence |
C
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| description |
binding site for residue FES S1 803
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| source |
: AC6
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20)
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chain |
S1 |
| residue |
38-55 |
| type |
prosite |
| sequence |
PRFCYHERLSVAGNCRMC
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| description |
COMPLEX1_75K_1 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. PrfCYherlsvaGnCRmC
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| source |
prosite : PS00641
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21)
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chain |
S1 |
| residue |
105-117 |
| type |
prosite |
| sequence |
CPICDQGGECDLQ
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| description |
COMPLEX1_75K_2 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. CPiCDqGGeCdLQ
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| source |
prosite : PS00642
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22)
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chain |
S1 |
| residue |
152-162 |
| type |
prosite |
| sequence |
RCIQCTRCIRF
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| description |
COMPLEX1_75K_3 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. RCIqCtRCIrF
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| source |
prosite : PS00643
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