eF-site ID 6qc8-.S8
PDB Code 6qc8
Chain S8

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Title Ovine respiratory complex I FRC open class 2
Classification ELECTRON TRANSPORT
Compound NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
Source ORGANISM_COMMON: Sheep; ORGANISM_SCIENTIFIC: Ovis aries;
Sequence S8:  TYKYVNLREPSMDMKSVTDRAAQTLLWTELIRGLGMTLSY
LFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIAC
KLCEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCG
FCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDK
WEAEIAANIQADYLYR
Description (1)  NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (E.C.1.6.99.3,7.1.1.2), NDUFV2, NADH:ubiquinone oxidoreductase core subunit S1, NADH:ubiquinone oxidoreductase core subunit S2, NADH:ubiquinone oxidoreductase core subunit S3, NADH:ubiquinone oxidoreductase core subunit S7, NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial, NADH:ubiquinone oxidoreductase subunit V3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial, NADH:ubiquinone oxidoreductase subunit S4, NADH:ubiquinone oxidoreductase subunit A9, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, NDUFA5, NADH:ubiquinone oxidoreductase subunit A6, NDUFA7, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, Acyl carrier protein, NADH-ubiquinone oxidoreductase chain 3 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 1 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 6 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 4L (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 5 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 4 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 2 (E.C.7.1.1.2), NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, NADH:ubiquinone oxidoreductase subunit B5, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8, NADH:ubiquinone oxidoreductase subunit B10, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial, NADH:ubiquinone oxidoreductase subunit S5, NADH:ubiquinone oxidoreductase subunit A3, NADH:ubiquinone oxidoreductase subunit B3, NADH dehydrogenase [ubiquinone] 1 subunit C2, NADH:ubiquinone oxidoreductase subunit B4, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NADH:ubiquinone oxidoreductase subunit B9, NADH:ubiquinone oxidoreductase subunit B2, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial, Uncharacterized protein, NADH dehydrogenase 1 alpha subcomplex


Functional site

1) chain S8
residue 65
type
sequence H
description binding site for residue SF4 S8 201
source : AC8

2) chain S8
residue 87
type
sequence C
description binding site for residue SF4 S8 201
source : AC8

3) chain S8
residue 88
type
sequence P
description binding site for residue SF4 S8 201
source : AC8

4) chain S8
residue 92
type
sequence I
description binding site for residue SF4 S8 201
source : AC8

5) chain S8
residue 116
type
sequence C
description binding site for residue SF4 S8 201
source : AC8

6) chain S8
residue 117
type
sequence I
description binding site for residue SF4 S8 201
source : AC8

7) chain S8
residue 118
type
sequence Y
description binding site for residue SF4 S8 201
source : AC8

8) chain S8
residue 119
type
sequence C
description binding site for residue SF4 S8 201
source : AC8

9) chain S8
residue 120
type
sequence G
description binding site for residue SF4 S8 201
source : AC8

10) chain S8
residue 122
type
sequence C
description binding site for residue SF4 S8 201
source : AC8

11) chain S8
residue 133
type
sequence E
description binding site for residue SF4 S8 201
source : AC8

12) chain S8
residue 77
type
sequence C
description binding site for residue SF4 S8 202
source : AC9

13) chain S8
residue 79
type
sequence A
description binding site for residue SF4 S8 202
source : AC9

14) chain S8
residue 80
type
sequence C
description binding site for residue SF4 S8 202
source : AC9

15) chain S8
residue 81
type
sequence K
description binding site for residue SF4 S8 202
source : AC9

16) chain S8
residue 83
type
sequence C
description binding site for residue SF4 S8 202
source : AC9

17) chain S8
residue 94
type
sequence I
description binding site for residue SF4 S8 202
source : AC9

18) chain S8
residue 109
type
sequence Y
description binding site for residue SF4 S8 202
source : AC9

19) chain S8
residue 126
type
sequence C
description binding site for residue SF4 S8 202
source : AC9

20) chain S8
residue 128
type
sequence V
description binding site for residue SF4 S8 202
source : AC9

21) chain S8
residue 77-88
type prosite
sequence CIACKLCEAVCP
description 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiACKlCEaVCP
source prosite : PS00198

22) chain S8
residue 116-127
type prosite
sequence CIYCGFCQEACP
description 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiACKlCEaVCP
source prosite : PS00198


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