eF-site ID 6qc5-.S1
PDB Code 6qc5
Chain S1

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Title Ovine respiratory complex I FRC closed class 1
Classification ELECTRON TRANSPORT
Compound NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
Source ORGANISM_COMMON: Sheep; ORGANISM_SCIENTIFIC: Ovis aries;
Sequence S1:  SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHER
LSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEK
TKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGS
DRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASE
IAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPV
GALTSKPYAFTARPWETRKTESIDVMDAVGSNIVVSTRTG
EVMRILPRMHEDINEEWISDKTRFAYDGLKRQRLTEPMVR
NEKGLLTHTTWEDALSRVAGMLQSCQGNDVAAIAGGLVDA
EALIALKDLLNRVDSDTLCTEEVFPTAGAGTDLRSNYLLN
TTIAGVEEADVVLLVGTNPRFEAPLFNARIRKSWLHNDLK
VALIGSPVDLTYRYDHLGDSPKILQDIASGSHPFSQVLQE
AKKPMVVLGSSALQRNDGAAILAAVSNIAQKIRTSSGVTG
DWKVMNILHRIASQVAALDLGYKPGVEAIRKNPPKMLFLL
GADGGCVTRQDLPKDCFIVYQGHHGDVGAPIADVILPGAA
YTEKSATYVNTEGRAQQTKVAVMPPGLAREDWKIIRALSE
IAGMTLPYDTLDQVRNRLEEVSPNLVRYDDVEGANYFQQA
SELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMA
KCVKAVTE
Description (1)  NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (E.C.1.6.99.3,7.1.1.2), Uncharacterized protein, NADH:ubiquinone oxidoreductase core subunit S1, NDUFS2,NADH:ubiquinone oxidoreductase core subunit S2, NADH:ubiquinone oxidoreductase core subunit S3, NADH:ubiquinone oxidoreductase core subunit S7,NDUFS7, NDUFS8, NDUFV3, NDUFS6, NADH:ubiquinone oxidoreductase subunit S4, NADH:ubiquinone oxidoreductase subunit A9, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, NADH:ubiquinone oxidoreductase subunit A6, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, Acyl carrier protein, NDUFA13, NADH-ubiquinone oxidoreductase chain 3 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 1 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 6 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 4L (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 5 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 4 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 2 (E.C.7.1.1.2), NADH:ubiquinone oxidoreductase subunit B5, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8, NDUFB10, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial, NADH:ubiquinone oxidoreductase subunit S5, NADH:ubiquinone oxidoreductase subunit A3, NADH:ubiquinone oxidoreductase subunit B3, NADH dehydrogenase [ubiquinone] 1 subunit C2, NADH:ubiquinone oxidoreductase subunit B4, NDUFB6, NADH:ubiquinone oxidoreductase subunit B7, NADH:ubiquinone oxidoreductase subunit B9, NADH:ubiquinone oxidoreductase subunit B2, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial, NDUFC1, NDUFA1


Functional site

1) chain S1
residue 101
type
sequence H
description binding site for residue SF4 S1 801
source : AC4

2) chain S1
residue 104
type
sequence D
description binding site for residue SF4 S1 801
source : AC4

3) chain S1
residue 105
type
sequence C
description binding site for residue SF4 S1 801
source : AC4

4) chain S1
residue 108
type
sequence C
description binding site for residue SF4 S1 801
source : AC4

5) chain S1
residue 114
type
sequence C
description binding site for residue SF4 S1 801
source : AC4

6) chain S1
residue 117
type
sequence Q
description binding site for residue SF4 S1 801
source : AC4

7) chain S1
residue 205
type
sequence V
description binding site for residue SF4 S1 801
source : AC4

8) chain S1
residue 206
type
sequence G
description binding site for residue SF4 S1 801
source : AC4

9) chain S1
residue 153
type
sequence C
description binding site for residue SF4 S1 802
source : AC5

10) chain S1
residue 154
type
sequence I
description binding site for residue SF4 S1 802
source : AC5

11) chain S1
residue 156
type
sequence C
description binding site for residue SF4 S1 802
source : AC5

12) chain S1
residue 157
type
sequence T
description binding site for residue SF4 S1 802
source : AC5

13) chain S1
residue 159
type
sequence C
description binding site for residue SF4 S1 802
source : AC5

14) chain S1
residue 203
type
sequence C
description binding site for residue SF4 S1 802
source : AC5

15) chain S1
residue 204
type
sequence P
description binding site for residue SF4 S1 802
source : AC5

16) chain S1
residue 41
type
sequence C
description binding site for residue FES S1 803
source : AC6

17) chain S1
residue 42
type
sequence Y
description binding site for residue FES S1 803
source : AC6

18) chain S1
residue 51
type
sequence N
description binding site for residue FES S1 803
source : AC6

19) chain S1
residue 52
type
sequence C
description binding site for residue FES S1 803
source : AC6

20) chain S1
residue 53
type
sequence R
description binding site for residue FES S1 803
source : AC6

21) chain S1
residue 55
type
sequence C
description binding site for residue FES S1 803
source : AC6

22) chain S1
residue 69
type
sequence C
description binding site for residue FES S1 803
source : AC6

23) chain S1
residue 38-55
type prosite
sequence PRFCYHERLSVAGNCRMC
description COMPLEX1_75K_1 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. PrfCYherlsvaGnCRmC
source prosite : PS00641

24) chain S1
residue 105-117
type prosite
sequence CPICDQGGECDLQ
description COMPLEX1_75K_2 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. CPiCDqGGeCdLQ
source prosite : PS00642

25) chain S1
residue 152-162
type prosite
sequence RCIQCTRCIRF
description COMPLEX1_75K_3 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. RCIqCtRCIrF
source prosite : PS00643


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