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eF-site ID
|
6qc5-.D5 |
PDB Code
|
6qc5 |
Chain
|
D5 |
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Title
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Ovine respiratory complex I FRC closed class 1 |
Classification
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ELECTRON TRANSPORT |
Compound
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NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial |
Source
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ORGANISM_COMMON: Sheep; ORGANISM_SCIENTIFIC: Ovis aries; |
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Sequence
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D5: |
MNLFSSLTLVTLILLTMPIAAINFNTHKFTNYPLYVKTTI
SCAFITSMIPTMMFIHTGQEMIISNWHWLTIQTLKLSLSF
KMDFFSMMFVPVALFVTWSIMEFSMWYMHSDPNINQFFKY
LLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG
RTDANTAALQAILYNRIGDIGFILAMAWFLINLNTWDLQQ
IFMLNPNDSNLPLMGLILAATGKSAQFGLHPWLPSAMEGP
TPVSALLHSSTMVVAGIFLLIRFYPLTENNKFGQSIMLCL
GAMTTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGIN
QPHLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMG
GLFKAMPFTTTALIIGSLALTGMPFLTGFYSKDLIIESAN
TSYTNAWALLMTLVATSFTAIYSTRIIFFALLGQPRFPTL
ININENNPFLINSIKRLLIGSLFAGFIISNNIPPMTIPQM
TMPHYLKMTALTVTILGFILALEISNTTHYLKFNYPSNTF
KFSNLLGYYPTIMHRLTPYMNLTMSQKSASSLLDLIWLET
ILPKTISLAQMKMSTTITSQKGLIKLYFLSFLITILISTT
LLNFHE
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Description
|
(1) |
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (E.C.1.6.99.3,7.1.1.2), Uncharacterized protein, NADH:ubiquinone oxidoreductase core subunit S1, NDUFS2,NADH:ubiquinone oxidoreductase core subunit S2, NADH:ubiquinone oxidoreductase core subunit S3, NADH:ubiquinone oxidoreductase core subunit S7,NDUFS7, NDUFS8, NDUFV3, NDUFS6, NADH:ubiquinone oxidoreductase subunit S4, NADH:ubiquinone oxidoreductase subunit A9, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, NADH:ubiquinone oxidoreductase subunit A6, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, Acyl carrier protein, NDUFA13, NADH-ubiquinone oxidoreductase chain 3 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 1 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 6 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 4L (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 5 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 4 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 2 (E.C.7.1.1.2), NADH:ubiquinone oxidoreductase subunit B5, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8, NDUFB10, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial, NADH:ubiquinone oxidoreductase subunit S5, NADH:ubiquinone oxidoreductase subunit A3, NADH:ubiquinone oxidoreductase subunit B3, NADH dehydrogenase [ubiquinone] 1 subunit C2, NADH:ubiquinone oxidoreductase subunit B4, NDUFB6, NADH:ubiquinone oxidoreductase subunit B7, NADH:ubiquinone oxidoreductase subunit B9, NADH:ubiquinone oxidoreductase subunit B2, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial, NDUFC1, NDUFA1
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Functional site
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1)
|
chain |
D5 |
residue |
562 |
type |
|
sequence |
L
|
description |
binding site for residue 3PE S2 501
|
source |
: AC7
|
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2)
|
chain |
D5 |
residue |
567 |
type |
|
sequence |
S
|
description |
binding site for residue 3PE S2 501
|
source |
: AC7
|
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3)
|
chain |
D5 |
residue |
570 |
type |
|
sequence |
Q
|
description |
binding site for residue 3PE S2 501
|
source |
: AC7
|
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4)
|
chain |
D5 |
residue |
166 |
type |
|
sequence |
T
|
description |
binding site for residue 3PE D5 701
|
source |
: AD5
|
|
5)
|
chain |
D5 |
residue |
169 |
type |
|
sequence |
L
|
description |
binding site for residue 3PE D5 701
|
source |
: AD5
|
|
6)
|
chain |
D5 |
residue |
170 |
type |
|
sequence |
Q
|
description |
binding site for residue 3PE D5 701
|
source |
: AD5
|
|
7)
|
chain |
D5 |
residue |
174 |
type |
|
sequence |
Y
|
description |
binding site for residue 3PE D5 701
|
source |
: AD5
|
|
8)
|
chain |
D5 |
residue |
534 |
type |
|
sequence |
H
|
description |
binding site for residue 3PE D5 701
|
source |
: AD5
|
|
9)
|
chain |
D5 |
residue |
537 |
type |
|
sequence |
T
|
description |
binding site for residue 3PE D5 701
|
source |
: AD5
|
|
10)
|
chain |
D5 |
residue |
538 |
type |
|
sequence |
P
|
description |
binding site for residue 3PE D5 701
|
source |
: AD5
|
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11)
|
chain |
D5 |
residue |
541 |
type |
|
sequence |
N
|
description |
binding site for residue 3PE D5 701
|
source |
: AD5
|
|
12)
|
chain |
D5 |
residue |
366-386 |
type |
TRANSMEM |
sequence |
MPFTTTALIIGSLALTGMPFL
|
description |
Helical => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
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13)
|
chain |
D5 |
residue |
413-433 |
type |
TRANSMEM |
sequence |
LVATSFTAIYSTRIIFFALLG
|
description |
Helical => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
|
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14)
|
chain |
D5 |
residue |
457-477 |
type |
TRANSMEM |
sequence |
LLIGSLFAGFIISNNIPPMTI
|
description |
Helical => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
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15)
|
chain |
D5 |
residue |
485-505 |
type |
TRANSMEM |
sequence |
YLKMTALTVTILGFILALEIS
|
description |
Helical => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
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16)
|
chain |
D5 |
residue |
582-602 |
type |
TRANSMEM |
sequence |
GLIKLYFLSFLITILISTTLL
|
description |
Helical => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
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