eF-site ID 6qc5-.D2
PDB Code 6qc5
Chain D2

click to enlarge
Title Ovine respiratory complex I FRC closed class 1
Classification ELECTRON TRANSPORT
Compound NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
Source ORGANISM_COMMON: Sheep; ORGANISM_SCIENTIFIC: Ovis aries;
Sequence D2:  MNPIILIIILMTVMLGTIIVMISTHWLLIWIGFEMNMLAI
IPIMMKKHNPRATEASTKYFLTQSTASMLLMMAIIINLMF
SGQWTVMKLFNPMASMLMTMALAMKLGMAPFHFWVPEVTQ
GIPLSSGLILLTWQKLAPMSVLYQILPSINLDLILTLSIL
SITIGGWGGLNQTQLRKIMAYSSIAHMGWMTAVLLYNPTM
TLLNLIIYIIMTSTMFTLFMANSTTTTLSLSHTWNKAPIM
TILVLITLLSMGGLPPLSGFMPKWMIIQEMTKNDSIILPT
LMAITALLNLYFYMRLTYSTALTMFPSTNNMKMKWQFPTT
KRMTLLPTMTVLSTMLLPLTPILSILE
Description (1)  NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (E.C.1.6.99.3,7.1.1.2), Uncharacterized protein, NADH:ubiquinone oxidoreductase core subunit S1, NDUFS2,NADH:ubiquinone oxidoreductase core subunit S2, NADH:ubiquinone oxidoreductase core subunit S3, NADH:ubiquinone oxidoreductase core subunit S7,NDUFS7, NDUFS8, NDUFV3, NDUFS6, NADH:ubiquinone oxidoreductase subunit S4, NADH:ubiquinone oxidoreductase subunit A9, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, NADH:ubiquinone oxidoreductase subunit A6, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, Acyl carrier protein, NDUFA13, NADH-ubiquinone oxidoreductase chain 3 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 1 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 6 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 4L (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 5 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 4 (E.C.7.1.1.2), NADH-ubiquinone oxidoreductase chain 2 (E.C.7.1.1.2), NADH:ubiquinone oxidoreductase subunit B5, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8, NDUFB10, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial, NADH:ubiquinone oxidoreductase subunit S5, NADH:ubiquinone oxidoreductase subunit A3, NADH:ubiquinone oxidoreductase subunit B3, NADH dehydrogenase [ubiquinone] 1 subunit C2, NADH:ubiquinone oxidoreductase subunit B4, NDUFB6, NADH:ubiquinone oxidoreductase subunit B7, NADH:ubiquinone oxidoreductase subunit B9, NADH:ubiquinone oxidoreductase subunit B2, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial, NDUFC1, NDUFA1


Functional site

1) chain D2
residue 288
type
sequence L
description binding site for residue 3PE S2 501
source : AC7

2) chain D2
residue 291
type
sequence Y
description binding site for residue 3PE S2 501
source : AC7

3) chain D2
residue 276
type
sequence I
description binding site for residue PC1 AK 201
source : AD6

4) chain D2
residue 3-23
type TRANSMEM
sequence PIILIIILMTVMLGTIIVMIS
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

5) chain D2
residue 274-294
type TRANSMEM
sequence DSIILPTLMAITALLNLYFYM
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

6) chain D2
residue 325-345
type TRANSMEM
sequence LLPTMTVLSTMLLPLTPILSI
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

7) chain D2
residue 25-45
type TRANSMEM
sequence HWLLIWIGFEMNMLAIIPIMM
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

8) chain D2
residue 67-87
type TRANSMEM
sequence SMLLMMAIIINLMFSGQWTVM
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

9) chain D2
residue 96-116
type TRANSMEM
sequence MLMTMALAMKLGMAPFHFWVP
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

10) chain D2
residue 122-142
type TRANSMEM
sequence IPLSSGLILLTWQKLAPMSVL
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

11) chain D2
residue 145-165
type TRANSMEM
sequence ILPSINLDLILTLSILSITIG
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

12) chain D2
residue 178-198
type TRANSMEM
sequence IMAYSSIAHMGWMTAVLLYNP
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

13) chain D2
residue 200-220
type TRANSMEM
sequence MTLLNLIIYIIMTSTMFTLFM
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

14) chain D2
residue 237-257
type TRANSMEM
sequence APIMTILVLITLLSMGGLPPL
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1


Display surface

Download
Links