eF-site ID 6q9d-.V1 PDB Code 6q9d Chain V1 click to enlarge Title CI Peripheral Arm focused refinement from Ovine respiratory SC I+III2 Classification ELECTRON TRANSPORT Compound NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Source ORGANISM_COMMON: Sheep; ORGANISM_SCIENTIFIC: Ovis aries; Sequence V1:  KTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEI LLKGPDWILGEVKTSGLRGRGGAGFPTGLKWSFMNKPSDG RPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGGRA MGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACG SGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPP FPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFGRE RNSGTKLFNISGHVNNPCTVEEEMSVPLKELIEKHAGGVT GGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALIQAQTG LGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREG VDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALG DGAAWPVQGLIRHFRPELEERMQRFAQQHQ Description (1)  NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (E.C.1.6.99.3,7.1.1.2), NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial, NADH:ubiquinone oxidoreductase core subunit S1, NADH:ubiquinone oxidoreductase core subunit S2,NADH:ubiquinone oxidoreductase core subunit S2, NADH:ubiquinone oxidoreductase core subunit S3, NADH:ubiquinone oxidoreductase core subunit S7, NADH:ubiquinone oxidoreductase core subunit S8, NADH:ubiquinone oxidoreductase subunit V3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial, NADH:ubiquinone oxidoreductase subunit S4, NADH:ubiquinone oxidoreductase subunit A9, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, NADH:ubiquinone oxidoreductase subunit A6, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, Acyl carrier protein, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 Functional site 1) chain V1 residue 203 type sequence P description binding site for residue SF4 V1 500 source : AC1 2) chain V1 residue 358 type sequence S description binding site for residue SF4 V1 500 source : AC1 3) chain V1 residue 359 type sequence C description binding site for residue SF4 V1 500 source : AC1 4) chain V1 residue 360 type sequence G description binding site for residue SF4 V1 500 source : AC1 5) chain V1 residue 361 type sequence Q description binding site for residue SF4 V1 500 source : AC1 6) chain V1 residue 362 type sequence C description binding site for residue SF4 V1 500 source : AC1 7) chain V1 residue 365 type sequence C description binding site for residue SF4 V1 500 source : AC1 8) chain V1 residue 403 type sequence T description binding site for residue SF4 V1 500 source : AC1 9) chain V1 residue 404 type sequence I description binding site for residue SF4 V1 500 source : AC1 10) chain V1 residue 405 type sequence C description binding site for residue SF4 V1 500 source : AC1 11) chain V1 residue 67 type sequence G description binding site for residue FMN V1 501 source : AC2 12) chain V1 residue 68 type sequence R description binding site for residue FMN V1 501 source : AC2 13) chain V1 residue 69 type sequence G description binding site for residue FMN V1 501 source : AC2 14) chain V1 residue 71 type sequence A description binding site for residue FMN V1 501 source : AC2 15) chain V1 residue 73 type sequence F description binding site for residue FMN V1 501 source : AC2 16) chain V1 residue 78 type sequence K description binding site for residue FMN V1 501 source : AC2 17) chain V1 residue 96 type sequence N description binding site for residue FMN V1 501 source : AC2 18) chain V1 residue 98 type sequence D description binding site for residue FMN V1 501 source : AC2 19) chain V1 residue 184 type sequence Y description binding site for residue FMN V1 501 source : AC2 20) chain V1 residue 187 type sequence G description binding site for residue FMN V1 501 source : AC2 21) chain V1 residue 188 type sequence E description binding site for residue FMN V1 501 source : AC2 22) chain V1 residue 222 type sequence V description binding site for residue FMN V1 501 source : AC2 23) chain V1 residue 224 type sequence N description binding site for residue FMN V1 501 source : AC2 24) chain V1 residue 227 type sequence T description binding site for residue FMN V1 501 source : AC2 25) chain V1 residue 180-195 type prosite sequence GAGAYICGEETALIES description COMPLEX1_51K_1 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. GAGAYICGEETALIES source prosite : PS00644 26) chain V1 residue 357-368 type prosite sequence ESCGQCTPCREG description COMPLEX1_51K_2 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. ESCGqCtPCReG source prosite : PS00645

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