eF-site ID 6q9d-.S1 PDB Code 6q9d Chain S1 click to enlarge Title CI Peripheral Arm focused refinement from Ovine respiratory SC I+III2 Classification ELECTRON TRANSPORT Compound NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Source ORGANISM_COMMON: Sheep; ORGANISM_SCIENTIFIC: Ovis aries; Sequence S1:  SNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHER LSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEK TKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGS DRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASE IAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPV GALTSKPYAFTARPWETRKTESIDVMDAVGSNIVVSTRTG EVMRILPRMHEDINEEWISDKTRFAYDGLKRQRLTEPMVR NEKGLLTHTTWEDALSRVAGMLQSCQGNDVAAIAGGLVDA EALIALKDLLNRVDSDTLCTEEVFPTAGAGTDLRSNYLLN TTIAGVEEADVVLLVGTNPRFEAPLFNARIRKSWLHNDLK VALIGSPVDLTYRYDHLGDSPKILQDIASGSHPFSQVLQE AKKPMVVLGSSALQRNDGAAILAAVSNIAQKIRTSSGVTG DWKVMNILHRIASQVAALDLGYKPGVEAIRKNPPKMLFLL GADGGCVTRQDLPKDCFIVYQGHHGDVGAPIADVILPGAA YTEKSATYVNTEGRAQQTKVAVMPPGLAREDWKIIRALSE IAGMTLPYDTLDQVRNRLEEVSPNLVRYDDVEGANYFQQA SELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMA KCVKAVTE Description (1)  NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (E.C.1.6.99.3,7.1.1.2), NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial, NADH:ubiquinone oxidoreductase core subunit S1, NADH:ubiquinone oxidoreductase core subunit S2,NADH:ubiquinone oxidoreductase core subunit S2, NADH:ubiquinone oxidoreductase core subunit S3, NADH:ubiquinone oxidoreductase core subunit S7, NADH:ubiquinone oxidoreductase core subunit S8, NADH:ubiquinone oxidoreductase subunit V3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial, NADH:ubiquinone oxidoreductase subunit S4, NADH:ubiquinone oxidoreductase subunit A9, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, NADH:ubiquinone oxidoreductase subunit A6, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, Acyl carrier protein, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 Functional site 1) chain S1 residue 101 type sequence H description binding site for residue SF4 S1 801 source : AC4 2) chain S1 residue 104 type sequence D description binding site for residue SF4 S1 801 source : AC4 3) chain S1 residue 105 type sequence C description binding site for residue SF4 S1 801 source : AC4 4) chain S1 residue 108 type sequence C description binding site for residue SF4 S1 801 source : AC4 5) chain S1 residue 114 type sequence C description binding site for residue SF4 S1 801 source : AC4 6) chain S1 residue 117 type sequence Q description binding site for residue SF4 S1 801 source : AC4 7) chain S1 residue 205 type sequence V description binding site for residue SF4 S1 801 source : AC4 8) chain S1 residue 206 type sequence G description binding site for residue SF4 S1 801 source : AC4 9) chain S1 residue 153 type sequence C description binding site for residue SF4 S1 802 source : AC5 10) chain S1 residue 154 type sequence I description binding site for residue SF4 S1 802 source : AC5 11) chain S1 residue 156 type sequence C description binding site for residue SF4 S1 802 source : AC5 12) chain S1 residue 157 type sequence T description binding site for residue SF4 S1 802 source : AC5 13) chain S1 residue 159 type sequence C description binding site for residue SF4 S1 802 source : AC5 14) chain S1 residue 203 type sequence C description binding site for residue SF4 S1 802 source : AC5 15) chain S1 residue 205 type sequence V description binding site for residue SF4 S1 802 source : AC5 16) chain S1 residue 41 type sequence C description binding site for residue FES S1 803 source : AC6 17) chain S1 residue 42 type sequence Y description binding site for residue FES S1 803 source : AC6 18) chain S1 residue 50 type sequence G description binding site for residue FES S1 803 source : AC6 19) chain S1 residue 52 type sequence C description binding site for residue FES S1 803 source : AC6 20) chain S1 residue 53 type sequence R description binding site for residue FES S1 803 source : AC6 21) chain S1 residue 55 type sequence C description binding site for residue FES S1 803 source : AC6 22) chain S1 residue 69 type sequence C description binding site for residue FES S1 803 source : AC6 23) chain S1 residue 38-55 type prosite sequence PRFCYHERLSVAGNCRMC description COMPLEX1_75K_1 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. PrfCYherlsvaGnCRmC source prosite : PS00641 24) chain S1 residue 105-117 type prosite sequence CPICDQGGECDLQ description COMPLEX1_75K_2 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. CPiCDqGGeCdLQ source prosite : PS00642 25) chain S1 residue 152-162 type prosite sequence RCIQCTRCIRF description COMPLEX1_75K_3 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. RCIqCtRCIrF source prosite : PS00643

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