eF-site ID 6q7m-F
PDB Code 6q7m
Chain F

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Title Spiral structure of E. coli RavA in the RavA-LdcI cage-like complex
Classification HYDROLASE
Compound Inducible lysine decarboxylase
Source (J7QAN2_ECOLX)
Sequence F:  MNVIAILNHMGVYFKEEPIRELHRALERLNFQIVYPNDRD
DLLKLIENNARLCGVIFDWDKYNLELCEEISKMNENLPLY
AFANTYSTLDVSLNDLRLQISFFEYALGAAEDIANKIKQT
TDEYINTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQK
SPVGSLFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEA
EQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILI
DRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEF
QHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKK
TLDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIY
ETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTS
PHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIK
RLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNID
NEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDE
HGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKRAF
DLNLRVKNMLPSLYREDPEFYENMRIQELAQNIHKLIVHH
NLPDLMYRAFEVLPTMVMTPYAAFQKELHGMTEEVYLDEM
VGRINANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLC
EIGAHYPGFETDIHGAYRQADGRYTVKVLKE
Description (1)  Inducible lysine decarboxylase (E.C.4.1.1.18), ATPase RavA (E.C.3.6.3.-)


Functional site

1) chain F
residue 398
type
sequence T
description binding site for residue PLP A 801
source : AC1

2) chain F
residue 399
type
sequence T
description binding site for residue PLP A 801
source : AC1

3) chain F
residue 400
type
sequence S
description binding site for residue PLP A 801
source : AC1

4) chain F
residue 220
type
sequence T
description binding site for Di-peptide PLP F 801 and LYS F 367
source : AD2

5) chain F
residue 221
type
sequence S
description binding site for Di-peptide PLP F 801 and LYS F 367
source : AD2

6) chain F
residue 245
type
sequence H
description binding site for Di-peptide PLP F 801 and LYS F 367
source : AD2

7) chain F
residue 330
type
sequence D
description binding site for Di-peptide PLP F 801 and LYS F 367
source : AD2

8) chain F
residue 332
type
sequence A
description binding site for Di-peptide PLP F 801 and LYS F 367
source : AD2

9) chain F
residue 333
type
sequence W
description binding site for Di-peptide PLP F 801 and LYS F 367
source : AD2

10) chain F
residue 364
type
sequence S
description binding site for Di-peptide PLP F 801 and LYS F 367
source : AD2

11) chain F
residue 365
type
sequence T
description binding site for Di-peptide PLP F 801 and LYS F 367
source : AD2

12) chain F
residue 366
type
sequence H
description binding site for Di-peptide PLP F 801 and LYS F 367
source : AD2

13) chain F
residue 368
type
sequence L
description binding site for Di-peptide PLP F 801 and LYS F 367
source : AD2

14) chain F
residue 369
type
sequence L
description binding site for Di-peptide PLP F 801 and LYS F 367
source : AD2

15) chain F
residue 367
type MOD_RES
sequence K
description N6-(pyridoxal phosphate)lysine
source Swiss-Prot : SWS_FT_FI1


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