eF-site ID 6q7l-D
PDB Code 6q7l
Chain D

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Title Spiral structure of E. coli RavA in the RavA-LdcI cage-like complex
Classification HYDROLASE
Compound Inducible lysine decarboxylase
Source (J7QAN2_ECOLX)
Sequence D:  MNVIAILNHMGVYFKEEPIRELHRALERLNFQIVYPNDRD
DLLKLIENNARLCGVIFDWDKYNLELCEEISKMNENLPLY
AFANTYSTLDVSLNDLRLQISFFEYALGAAEDIANKIKQT
TDEYINTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQK
SPVGSLFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEA
EQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILI
DRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEF
QHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKK
TLDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIY
ETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTS
PHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIK
RLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNID
NEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDE
HGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKRAF
DLNLRVKNMLPSLYREDPEFYENMRIQELAQNIHKLIVHH
NLPDLMYRAFEVLPTMVMTPYAAFQKELHGMTEEVYLDEM
VGRINANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLC
EIGAHYPGFETDIHGAYRQADGRYTVKVLKE
Description (1)  Inducible lysine decarboxylase (E.C.4.1.1.18), ATPase RavA (E.C.3.6.3.-)


Functional site

1) chain D
residue 219
type
sequence G
description binding site for Di-peptide PLP D 801 and LYS D 367
source : AC9

2) chain D
residue 220
type
sequence T
description binding site for Di-peptide PLP D 801 and LYS D 367
source : AC9

3) chain D
residue 221
type
sequence S
description binding site for Di-peptide PLP D 801 and LYS D 367
source : AC9

4) chain D
residue 245
type
sequence H
description binding site for Di-peptide PLP D 801 and LYS D 367
source : AC9

5) chain D
residue 330
type
sequence D
description binding site for Di-peptide PLP D 801 and LYS D 367
source : AC9

6) chain D
residue 332
type
sequence A
description binding site for Di-peptide PLP D 801 and LYS D 367
source : AC9

7) chain D
residue 333
type
sequence W
description binding site for Di-peptide PLP D 801 and LYS D 367
source : AC9

8) chain D
residue 364
type
sequence S
description binding site for Di-peptide PLP D 801 and LYS D 367
source : AC9

9) chain D
residue 365
type
sequence T
description binding site for Di-peptide PLP D 801 and LYS D 367
source : AC9

10) chain D
residue 366
type
sequence H
description binding site for Di-peptide PLP D 801 and LYS D 367
source : AC9

11) chain D
residue 368
type
sequence L
description binding site for Di-peptide PLP D 801 and LYS D 367
source : AC9

12) chain D
residue 369
type
sequence L
description binding site for Di-peptide PLP D 801 and LYS D 367
source : AC9

13) chain D
residue 398
type
sequence T
description binding site for Di-peptide PLP J 801 and LYS J 367
source : AD6

14) chain D
residue 399
type
sequence T
description binding site for Di-peptide PLP J 801 and LYS J 367
source : AD6

15) chain D
residue 400
type
sequence S
description binding site for Di-peptide PLP J 801 and LYS J 367
source : AD6

16) chain D
residue 367
type MOD_RES
sequence K
description N6-(pyridoxal phosphate)lysine
source Swiss-Prot : SWS_FT_FI1


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