eF-site ID 6q4u-ABC
PDB Code 6q4u
Chain A, B, C

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Title KlenTaq DNA pol in a closed ternary complex with 7-deaza-7-(2-(2-hydroxyethoxy)-N-(prop-2-yn-1-yl)acetamide)-2-dATP
Classification DNA BINDING PROTEIN
Compound DNA polymerase I, thermostable
Source (6Q4U)
Sequence A:  LEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVH
RAPEPYKALRDLKEARGLLAKDLSVLALREGLGLPPGDDP
MLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLF
ANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLDV
AYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERV
LFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVEKIL
QYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGR
LSSSDPNLQNIPVRTPLGQRIRRAFIAEEGWLLVALDYSQ
IELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREA
VDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAFI
ERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDL
EARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRLE
EMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPL
AVPLEVEVGIGEDWLSAKE
B:  GACCACGGCCAX
C:  AACTGTGGCCGTGGTC
Description


Functional site

1) chain A
residue 610
type
sequence D
description binding site for residue MG A 901
source : AC1

2) chain A
residue 785
type
sequence D
description binding site for residue MG A 901
source : AC1

3) chain B
residue 112
type
sequence X
description binding site for residue MG A 901
source : AC1

4) chain A
residue 610
type
sequence D
description binding site for residue MN A 902
source : AC2

5) chain A
residue 611
type
sequence Y
description binding site for residue MN A 902
source : AC2

6) chain A
residue 785
type
sequence D
description binding site for residue MN A 902
source : AC2

7) chain A
residue 573
type
sequence R
description binding site for residue HHZ A 903
source : AC3

8) chain A
residue 610
type
sequence D
description binding site for residue HHZ A 903
source : AC3

9) chain A
residue 611
type
sequence Y
description binding site for residue HHZ A 903
source : AC3

10) chain A
residue 612
type
sequence S
description binding site for residue HHZ A 903
source : AC3

11) chain A
residue 613
type
sequence Q
description binding site for residue HHZ A 903
source : AC3

12) chain A
residue 614
type
sequence I
description binding site for residue HHZ A 903
source : AC3

13) chain A
residue 615
type
sequence E
description binding site for residue HHZ A 903
source : AC3

14) chain A
residue 639
type
sequence H
description binding site for residue HHZ A 903
source : AC3

15) chain A
residue 659
type
sequence R
description binding site for residue HHZ A 903
source : AC3

16) chain A
residue 663
type
sequence K
description binding site for residue HHZ A 903
source : AC3

17) chain A
residue 664
type
sequence T
description binding site for residue HHZ A 903
source : AC3

18) chain A
residue 667
type
sequence F
description binding site for residue HHZ A 903
source : AC3

19) chain A
residue 785
type
sequence D
description binding site for residue HHZ A 903
source : AC3

20) chain B
residue 112
type
sequence X
description binding site for residue HHZ A 903
source : AC3

21) chain C
residue 204
type
sequence T
description binding site for residue HHZ A 903
source : AC3

22) chain C
residue 205
type
sequence G
description binding site for residue HHZ A 903
source : AC3

23) chain A
residue 545
type
sequence Y
description binding site for residue EDO A 904
source : AC4

24) chain A
residue 579
type
sequence P
description binding site for residue EDO A 904
source : AC4

25) chain A
residue 580
type
sequence N
description binding site for residue EDO A 904
source : AC4

26) chain A
residue 583
type
sequence N
description binding site for residue EDO A 904
source : AC4

27) chain C
residue 209
type
sequence C
description binding site for residue EDO A 904
source : AC4

28) chain B
residue 107
type
sequence G
description binding site for residue MG B 201
source : AC5

29) chain B
residue 108
type
sequence G
description binding site for residue MG B 201
source : AC5

30) chain C
residue 206
type
sequence T
description binding site for residue GOL C 301
source : AC6

31) chain C
residue 207
type
sequence G
description binding site for residue GOL C 301
source : AC6

32) chain C
residue 208
type
sequence G
description binding site for residue GOL C 301
source : AC6

33) chain C
residue 213
type
sequence G
description binding site for residue EDO C 302
source : AC7

34) chain C
residue 214
type
sequence G
description binding site for residue EDO C 302
source : AC7

35) chain A
residue 659-678
type prosite
sequence RRAAKTINFGVLYGMSAHRL
description DNA_POLYMERASE_A DNA polymerase family A signature. RraAKtinFGvlYgmSahrL
source prosite : PS00447


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