eF-site ID 6p68-ABC
PDB Code 6p68
Chain A, B, C

click to enlarge
Title Crystal structure of FGFR1-Y563C (FGFR4 surrogate) covalently bound to compound 22.
Classification TRANSFERASE
Compound Fibroblast growth factor receptor 1
Source (FGFR1_HUMAN)
Sequence A:  EYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLD
KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH
KNIINLLGACTQDGPLYVIVECASKGNLREYLQARRPPEE
QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE
DNVMKIADFGLARDIDYYKKTTNGRLPVKWMAPEALFDRI
YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG
HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR
IVALTSN
B:  EYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLD
KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH
KNIINLLGACTQDGPLYVIVECASKGNLREYLQARRPEEQ
LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED
NVMKIADFGLARDIDYYKKTTNGRLPVKWMAPEALFDRIY
THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH
RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI
VALTSN
C:  YELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDK
DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHK
NIINLLGACTQDGPLYVIVECASKGNLREYLQARRPPEEQ
LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED
NVMKIADFGLARDIDYYKKTTNGRLPVKWMAPEALFDRIY
THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH
RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI
VALTSN
Description


Functional site

1) chain A
residue 484
type
sequence L
description binding site for residue O1Y A 801
source : AC1

2) chain A
residue 494
type
sequence L
description binding site for residue O1Y A 801
source : AC1

3) chain A
residue 512
type
sequence A
description binding site for residue O1Y A 801
source : AC1

4) chain A
residue 514
type
sequence K
description binding site for residue O1Y A 801
source : AC1

5) chain A
residue 531
type
sequence E
description binding site for residue O1Y A 801
source : AC1

6) chain A
residue 535
type
sequence M
description binding site for residue O1Y A 801
source : AC1

7) chain A
residue 562
type
sequence E
description binding site for residue O1Y A 801
source : AC1

8) chain A
residue 563
type
sequence C
description binding site for residue O1Y A 801
source : AC1

9) chain A
residue 564
type
sequence A
description binding site for residue O1Y A 801
source : AC1

10) chain A
residue 571
type
sequence E
description binding site for residue O1Y A 801
source : AC1

11) chain A
residue 630
type
sequence L
description binding site for residue O1Y A 801
source : AC1

12) chain A
residue 640
type
sequence A
description binding site for residue O1Y A 801
source : AC1

13) chain A
residue 641
type
sequence D
description binding site for residue O1Y A 801
source : AC1

14) chain A
residue 642
type
sequence F
description binding site for residue O1Y A 801
source : AC1

15) chain A
residue 470
type
sequence R
description binding site for residue SO4 A 802
source : AC2

16) chain A
residue 471
type
sequence W
description binding site for residue SO4 A 802
source : AC2

17) chain A
residue 548
type
sequence L
description binding site for residue SO4 A 802
source : AC2

18) chain A
residue 549
type
sequence G
description binding site for residue SO4 A 802
source : AC2

19) chain B
residue 470
type
sequence R
description binding site for residue SO4 B 802
source : AC3

20) chain B
residue 471
type
sequence W
description binding site for residue SO4 B 802
source : AC3

21) chain B
residue 472
type
sequence E
description binding site for residue SO4 B 802
source : AC3

22) chain B
residue 548
type
sequence L
description binding site for residue SO4 B 802
source : AC3

23) chain B
residue 484
type
sequence L
description binding site for Di-peptide O1Y B 801 and CYS B 563
source : AC4

24) chain B
residue 492
type
sequence V
description binding site for Di-peptide O1Y B 801 and CYS B 563
source : AC4

25) chain B
residue 494
type
sequence L
description binding site for Di-peptide O1Y B 801 and CYS B 563
source : AC4

26) chain B
residue 510
type
sequence K
description binding site for Di-peptide O1Y B 801 and CYS B 563
source : AC4

27) chain B
residue 512
type
sequence A
description binding site for Di-peptide O1Y B 801 and CYS B 563
source : AC4

28) chain B
residue 514
type
sequence K
description binding site for Di-peptide O1Y B 801 and CYS B 563
source : AC4

29) chain B
residue 531
type
sequence E
description binding site for Di-peptide O1Y B 801 and CYS B 563
source : AC4

30) chain B
residue 535
type
sequence M
description binding site for Di-peptide O1Y B 801 and CYS B 563
source : AC4

31) chain B
residue 545
type
sequence I
description binding site for Di-peptide O1Y B 801 and CYS B 563
source : AC4

32) chain B
residue 561
type
sequence V
description binding site for Di-peptide O1Y B 801 and CYS B 563
source : AC4

33) chain B
residue 562
type
sequence E
description binding site for Di-peptide O1Y B 801 and CYS B 563
source : AC4

34) chain B
residue 564
type
sequence A
description binding site for Di-peptide O1Y B 801 and CYS B 563
source : AC4

35) chain B
residue 565
type
sequence S
description binding site for Di-peptide O1Y B 801 and CYS B 563
source : AC4

36) chain B
residue 640
type
sequence A
description binding site for Di-peptide O1Y B 801 and CYS B 563
source : AC4

37) chain B
residue 641
type
sequence D
description binding site for Di-peptide O1Y B 801 and CYS B 563
source : AC4

38) chain C
residue 484
type
sequence L
description binding site for Di-peptide O1Y C 801 and CYS C 563
source : AC5

39) chain C
residue 492
type
sequence V
description binding site for Di-peptide O1Y C 801 and CYS C 563
source : AC5

40) chain C
residue 494
type
sequence L
description binding site for Di-peptide O1Y C 801 and CYS C 563
source : AC5

41) chain C
residue 510
type
sequence K
description binding site for Di-peptide O1Y C 801 and CYS C 563
source : AC5

42) chain C
residue 512
type
sequence A
description binding site for Di-peptide O1Y C 801 and CYS C 563
source : AC5

43) chain C
residue 514
type
sequence K
description binding site for Di-peptide O1Y C 801 and CYS C 563
source : AC5

44) chain C
residue 531
type
sequence E
description binding site for Di-peptide O1Y C 801 and CYS C 563
source : AC5

45) chain C
residue 535
type
sequence M
description binding site for Di-peptide O1Y C 801 and CYS C 563
source : AC5

46) chain C
residue 545
type
sequence I
description binding site for Di-peptide O1Y C 801 and CYS C 563
source : AC5

47) chain C
residue 561
type
sequence V
description binding site for Di-peptide O1Y C 801 and CYS C 563
source : AC5

48) chain C
residue 562
type
sequence E
description binding site for Di-peptide O1Y C 801 and CYS C 563
source : AC5

49) chain C
residue 564
type
sequence A
description binding site for Di-peptide O1Y C 801 and CYS C 563
source : AC5

50) chain C
residue 565
type
sequence S
description binding site for Di-peptide O1Y C 801 and CYS C 563
source : AC5

51) chain C
residue 630
type
sequence L
description binding site for Di-peptide O1Y C 801 and CYS C 563
source : AC5

52) chain C
residue 640
type
sequence A
description binding site for Di-peptide O1Y C 801 and CYS C 563
source : AC5

53) chain C
residue 641
type
sequence D
description binding site for Di-peptide O1Y C 801 and CYS C 563
source : AC5

54) chain A
residue 623
type ACT_SITE
sequence D
description Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000255|PROSITE-ProRule:PRU10028, ECO:0000269|PubMed:19224897
source Swiss-Prot : SWS_FT_FI1

55) chain B
residue 623
type ACT_SITE
sequence D
description Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000255|PROSITE-ProRule:PRU10028, ECO:0000269|PubMed:19224897
source Swiss-Prot : SWS_FT_FI1

56) chain C
residue 623
type ACT_SITE
sequence D
description Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000255|PROSITE-ProRule:PRU10028, ECO:0000269|PubMed:19224897
source Swiss-Prot : SWS_FT_FI1

57) chain A
residue 484
type BINDING
sequence L
description
source Swiss-Prot : SWS_FT_FI2

58) chain B
residue 568
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI2

59) chain B
residue 627
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

60) chain B
residue 641
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

61) chain C
residue 484
type BINDING
sequence L
description
source Swiss-Prot : SWS_FT_FI2

62) chain C
residue 514
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI2

63) chain C
residue 562
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI2

64) chain C
residue 568
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI2

65) chain C
residue 627
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

66) chain C
residue 641
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

67) chain A
residue 514
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI2

68) chain A
residue 562
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI2

69) chain A
residue 568
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI2

70) chain A
residue 627
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

71) chain A
residue 641
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

72) chain B
residue 484
type BINDING
sequence L
description
source Swiss-Prot : SWS_FT_FI2

73) chain B
residue 514
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI2

74) chain B
residue 562
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI2

75) chain A
residue 463
type MOD_RES
sequence Y
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:16507368, ECO:0000269|PubMed:19224897, ECO:0000269|PubMed:8622701
source Swiss-Prot : SWS_FT_FI3

76) chain B
residue 463
type MOD_RES
sequence Y
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:16507368, ECO:0000269|PubMed:19224897, ECO:0000269|PubMed:8622701
source Swiss-Prot : SWS_FT_FI3

77) chain C
residue 463
type MOD_RES
sequence Y
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:16507368, ECO:0000269|PubMed:19224897, ECO:0000269|PubMed:8622701
source Swiss-Prot : SWS_FT_FI3

78) chain A
residue 653
type MOD_RES
sequence Y
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:16507368, ECO:0000269|PubMed:19224897, ECO:0000269|PubMed:19665973, ECO:0000269|PubMed:8622701
source Swiss-Prot : SWS_FT_FI4

79) chain A
residue 654
type MOD_RES
sequence Y
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:16507368, ECO:0000269|PubMed:19224897, ECO:0000269|PubMed:19665973, ECO:0000269|PubMed:8622701
source Swiss-Prot : SWS_FT_FI4

80) chain B
residue 653
type MOD_RES
sequence Y
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:16507368, ECO:0000269|PubMed:19224897, ECO:0000269|PubMed:19665973, ECO:0000269|PubMed:8622701
source Swiss-Prot : SWS_FT_FI4

81) chain B
residue 654
type MOD_RES
sequence Y
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:16507368, ECO:0000269|PubMed:19224897, ECO:0000269|PubMed:19665973, ECO:0000269|PubMed:8622701
source Swiss-Prot : SWS_FT_FI4

82) chain C
residue 653
type MOD_RES
sequence Y
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:16507368, ECO:0000269|PubMed:19224897, ECO:0000269|PubMed:19665973, ECO:0000269|PubMed:8622701
source Swiss-Prot : SWS_FT_FI4

83) chain C
residue 654
type MOD_RES
sequence Y
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:16507368, ECO:0000269|PubMed:19224897, ECO:0000269|PubMed:19665973, ECO:0000269|PubMed:8622701
source Swiss-Prot : SWS_FT_FI4

84) chain A
residue 484-514
type prosite
sequence LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK
description PROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. LGEGAFGQVVlAeaigldkdkpnrvtk...VAVK
source prosite : PS00107

85) chain A
residue 619-631
type prosite
sequence CIHRDLAARNVLV
description PROTEIN_KINASE_TYR Tyrosine protein kinases specific active-site signature. CIHrDLAARNVLV
source prosite : PS00109

86) chain A
residue 730
type MOD_RES
sequence Y
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:19224897, ECO:0000269|PubMed:8622701
source Swiss-Prot : SWS_FT_FI5

87) chain B
residue 730
type MOD_RES
sequence Y
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:19224897, ECO:0000269|PubMed:8622701
source Swiss-Prot : SWS_FT_FI5

88) chain C
residue 730
type MOD_RES
sequence Y
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:19224897, ECO:0000269|PubMed:8622701
source Swiss-Prot : SWS_FT_FI5


Display surface

Download
Links