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eF-site ID
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6oj6-E |
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PDB Code
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6oj6 |
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Chain
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E |
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click to enlarge
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Title
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In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (DLP_RNA) |
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Classification
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VIRAL PROTEIN/TRANSFERASE/RNA |
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Compound
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Inner capsid protein VP2 |
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Source
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ORGANISM_COMMON: RV-A; ORGANISM_SCIENTIFIC: Rotavirus A (strain RVA/Monkey/United States/RRV/1975/G3P5B[3]); |
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Sequence
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E: |
VQYEILQKTIPTFEPKESILKKLEDIKPEQVKKQTKLFRI
FEPRQLPVYRANGEKELRNRWYWKLKRDTLPDGDYDVREY
FLNLYDQVLTEMPDYLLLKDMAVENKNSRDAGKVVDSETA
AICDAIFQDEETEGVVRRFIAEMRQRVQADRNVVNYPSIL
HPIDHAFNEYFLQHQLVEPLNNDIIFNYIPERIRNDVNYI
LNMDRNLPSTARYIRPNLLQDRLNLHDNFESLWDTITTSN
YILARSVVPDLKELTGINSQAANDCFKTLIAAMLSQRTMS
LDFVTTNYMSLISGMWLLTVVPNDMFIRESLVACQLAIIN
TIIYPAFGMQRMHYRNGDPQTPFQIAEQQIQNFQVANWLH
FVNNNQFRQVVIDGVLNQVLNDNIRNGHVVNQLMEALMQL
SRQQFPTMPVDYKRSIQRGILLLSNRLGQLVDLTRLLAYN
YETLMACITMNMQHVQTLTTEKLQLTSVTSLCMLIGNATV
IPSPQTLFHYYNVNVNFHSNYNERINDAVAIITAANRLNL
YQKKMKSIVEDFLKRLQIFDISRVPDDQMYRLRDRLRLLP
VEIRRLDIFNLILMNMEQIERASDKIAQGVIIAYRDMQLE
RDEMYGYVNIARNLDGFQQINLEELMRTGDYAQITNMLLN
NQPVALVGALPFITDSSVISLVAKLDATVFAQIVKLRKVD
TLKPILYKINSDSNDFYLVANYDWVPTSTTKVYKQIPQQF
DFRASMHMLTSNLTFTVYSDLLAFVSADTVEPINAVAFDN
MRIMNEL
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Description
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