eF-site ID 6ogz-M
PDB Code 6ogz
Chain M

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Title In situ structure of Rotavirus RNA-dependent RNA polymerase at transcript-elongated state
Classification viral protein/rna/transferase
Compound RNA (5'-R(P*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*A)-3')
Source ORGANISM_SCIENTIFIC: Rotavirus A;
Sequence M:  IKIADEVKKSNKEESKQLLEVLKTKEEHQKEVQYEILQKT
IPTFEPKESILKKLEDIKPEQVKKQTKLFRIFEPRQLPVY
RANGEKELRNRWYWKLKRDTLPDGDYDVREYFLNLYDQVL
TEMPDYLLLKDMAVENKNSRDAGKVVDSETAAICDAIFQD
EETEGVVRRFIAEMRQRVQADRNVVNYPSILHPIDHAFNE
YFLQHQLVEPLNNDIIFNYIPERIRNDVNYILNMDRNLPS
TARYIRPNLLQDRLNLHDNFESLWDTITTSNYILARSVVP
DLKELVSTEAQIQKMSQDLQLEALTIQSETQFLTGINSQA
ANDCFKTLIAAMLSQRTMSLDFVTTNYMSLISGMWLLTVV
PNDMFIRESLVACQLAIINTIIYPAFGMQRMHYRNGDPQT
PFQIAEQQIQNFQVANWLHFVNNNQFRQVVIDGVLNQVLN
DNIRNGHVVNQLMEALMQLSRQQFPTMPVDYKRSIQRGIL
LLSNRLGQLVDLTRLLAYNYETLMACITMNMQHVQTLTTE
KLQLTSVTSLCMLIGNATVIPSPQTLFHYYNVNVNFHSNY
NERINDAVAIITAANRLNLYQKKMKSIVEDFLKRLQIFDI
SRVPDDQMYRLRDRLRLLPVEIRRLDIFNLILMNMEQIER
ASDKIAQGVIIAYRDMQLERDEMYGYVNIARNLDGFQQIN
LEELMRTGDYAQITNMLLNNQPVALVGALPFITDSSVISL
VAKLDATVFAQIVKLRKVDTLKPILYKINSDSNDFYLVAN
YDWVPTSTTKVYKQIPQQFDFRASMHMLTSNLTFTVYSDL
LAFVSADTVEPINAVAFDNMRIMNEL
Description (1)  RNA-dependent RNA polymerase of rotavirus A, Inner capsid protein VP2/RNA Complex

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