eF-site ID 6ogz-H
PDB Code 6ogz
Chain H

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Title In situ structure of Rotavirus RNA-dependent RNA polymerase at transcript-elongated state
Classification viral protein/rna/transferase
Compound RNA (5'-R(P*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*A)-3')
Source ORGANISM_SCIENTIFIC: Rotavirus A;
Sequence H:  LKTKEEHQKEVQYEILQKTIPTFEPKESILKKLEDIKPEQ
VKKQTKLFRIFEPRQLPVYRANGEKELRNRWYWKLKRDTL
PDGDYDVREYFLNLYDQVLTEMPDYLLLKDMAVENKNSRD
AGKVVDSETAAICDAIFQDEETEGVVRRFIAEMRQRVQAD
RNVVNYPSILHPIDHAFNEYFLQHQLVEPLNNDIIFNYIP
ERIRNDVNYILNMDRNLPSTARYIRPNLLQDRLNLHDNFE
SLWDTITTSNYILARSVVPDLKELVSTEAQIQKMSQDLQL
EALTIQSETQFLTGINSQAANDCFKTLIAAMLSQRTMSLD
FVTTNYMSLISGMWLLTVVPNDMFIRESLVACQLAIINTI
IYPAFGMQRMHYRNGDPQTPFQIAEQQIQNFQVANWLHFV
NNNQFRQVVIDGVLNQVLNDNIRNGHVVNQLMEALMQLSR
QQFPTMPVDYKRSIQRGILLLSNRLGQLVDLTRLLAYNYE
TLMACITMNMQHVQTLTTEKLQLTSVTSLCMLIGNATVIP
SPQTLFHYYNVNVNFHSNYNERINDAVAIITAANRLNLYQ
KKMKSIVEDFLKRLQIFDISRVPDDQMYRLRDRLRLLPVE
IRRLDIFNLILMNMEQIERASDKIAQGVIIAYRDMQLERD
EMYGYVNIARNLDGFQQINLEELMRTGDYAQITNMLLNNQ
PVALVGALPFITDSSVISLVAKLDATVFAQIVKLRKVDTL
KPILYKINSDSNDFYLVANYDWVPTSTTKVYKQIPQQFDF
RASMHMLTSNLTFTVYSDLLAFVSADTVEPINAVAFDNMR
IMNEL
Description (1)  RNA-dependent RNA polymerase of rotavirus A, Inner capsid protein VP2/RNA Complex

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