eF-site ID 6ogz-F
PDB Code 6ogz
Chain F

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Title In situ structure of Rotavirus RNA-dependent RNA polymerase at transcript-elongated state
Classification viral protein/rna/transferase
Compound RNA (5'-R(P*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*A)-3')
Source ORGANISM_SCIENTIFIC: Rotavirus A;
Sequence F:  TKEEHQKEVQYEILQKTIPTFEPKESILKKLEDIKPEQVK
KQTKLFRIFEPRQLPVYRANGEKELRNRWYWKLKRDTLPD
GDYDVREYFLNLYDQVLTEMPDYLLLKDMAVENKNSRDAG
KVVDSETAAICDAIFQDEETEGVVRRFIAEMRQRVQADRN
VVNYPSILHPIDHAFNEYFLQHQLVEPLNNDIIFNYIPER
IRNDVNYILNMDRNLPSTARYIRPNLLQDRLNLHDNFESL
WDTITTSNYILARSVVPDLKELVSTEAQIQKMSQDLQLEA
LTIQSETQFLTGINSQAANDCFKTLIAAMLSQRTMSLDFV
TTNYMSLISGMWLLTVVPNDMFIRESLVACQLAIINTIIY
PAFGMQRMHYRNGDPQTPFQIAEQQIQNFQVANWLHFVNN
NQFRQVVIDGVLNQVLNDNIRNGHVVNQLMEALMQLSRQQ
FPTMPVDYKRSIQRGILLLSNRLGQLVDLTRLLAYNYETL
MACITMNMQHVQTLTTEKLQLTSVTSLCMLIGNATVIPSP
QTLFHYYNVNVNFHSNYNERINDAVAIITAANRLNLYQKK
MKSIVEDFLKRLQIFDISRVPDDQMYRLRDRLRLLPVEIR
RLDIFNLILMNMEQIERASDKIAQGVIIAYRDMQLERDEM
YGYVNIARNLDGFQQINLEELMRTGDYAQITNMLLNNQPV
ALVGALPFITDSSVISLVAKLDATVFAQIVKLRKVDTLKP
ILYKINSDSNDFYLVANYDWVPTSTTKVYKQIPQQFDFRA
SMHMLTSNLTFTVYSDLLAFVSADTVEPINAVAFDNMRIM
NEL
Description (1)  RNA-dependent RNA polymerase of rotavirus A, Inner capsid protein VP2/RNA Complex

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