eF-site ID 6o1d-H
PDB Code 6o1d
Chain H

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Title Cryo-EM structure of the centromeric nucleosome with native alpha satellite DNA
Classification NUCLEAR PROTEIN
Compound Histone H3-like centromeric protein A
Source (6O1D)
Sequence H:  RSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIF
ERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHA
VSEGTKAVTKYTSA
Description


Functional site

1) chain H
residue 86
type CROSSLNK
sequence R
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:25218447
source Swiss-Prot : SWS_FT_FI14

2) chain H
residue 92
type CROSSLNK
sequence R
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:25218447
source Swiss-Prot : SWS_FT_FI14

3) chain H
residue 120
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:16307923, ECO:0000269|PubMed:16627869, ECO:0000269|PubMed:16713563
source Swiss-Prot : SWS_FT_FI18

4) chain H
residue 34
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:21726816
source Swiss-Prot : SWS_FT_FI20

5) chain H
residue 116
type MOD_RES
sequence K
description N5-methylglutamine => ECO:0000269|PubMed:24352239
source Swiss-Prot : SWS_FT_FI8

6) chain H
residue 120
type MOD_RES
sequence K
description N5-methylglutamine => ECO:0000269|PubMed:24352239
source Swiss-Prot : SWS_FT_FI8

7) chain H
residue 34
type MOD_RES
sequence K
description N5-methylglutamine => ECO:0000269|PubMed:24352239
source Swiss-Prot : SWS_FT_FI8

8) chain H
residue 46
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:22713238, ECO:0000269|PubMed:22980979
source Swiss-Prot : SWS_FT_FI11

9) chain H
residue 108
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:22713238, ECO:0000269|PubMed:22980979
source Swiss-Prot : SWS_FT_FI11

10) chain H
residue 43
type MOD_RES
sequence K
description N6-acetyllysine; alternate => ECO:0000250|UniProtKB:C0HKE1
source Swiss-Prot : SWS_FT_FI3

11) chain H
residue 85
type MOD_RES
sequence K
description N6-acetyllysine; alternate => ECO:0000250|UniProtKB:C0HKE1
source Swiss-Prot : SWS_FT_FI3


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