eF-site ID 6o1d-B
PDB Code 6o1d
Chain B

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Title Cryo-EM structure of the centromeric nucleosome with native alpha satellite DNA
Classification NUCLEAR PROTEIN
Compound Histone H3-like centromeric protein A
Source (6O1D)
Sequence B:  RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFL
ENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Description


Functional site

1) chain B
residue 44
type MOD_RES
sequence K
description N6-(beta-hydroxybutyryl)lysine; alternate => ECO:0000269|PubMed:27105115
source Swiss-Prot : SWS_FT_FI5

2) chain B
residue 91
type MOD_RES
sequence K
description N6-crotonyllysine; alternate => ECO:0000269|PubMed:21925322
source Swiss-Prot : SWS_FT_FI6

3) chain B
residue 77
type MOD_RES
sequence K
description N6-crotonyllysine; alternate => ECO:0000269|PubMed:21925322
source Swiss-Prot : SWS_FT_FI6

4) chain B
residue 80
type CROSSLNK
sequence T
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:15386022, ECO:0000269|PubMed:16359901, ECO:0000269|PubMed:16702407, ECO:0000269|PubMed:25470042
source Swiss-Prot : SWS_FT_FI12

5) chain B
residue 79
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI16

6) chain B
residue 59
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI16

7) chain B
residue 31
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate => ECO:0000269|PubMed:30886146
source Swiss-Prot : SWS_FT_FI17

8) chain B
residue 91
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000269|PubMed:19818714
source Swiss-Prot : SWS_FT_FI15


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