eF-site ID 6no5-ABCD
PDB Code 6no5
Chain A, B, C, D

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Title ADP bound to K46bE&K114bD mutant ATP-grasp fold of Blastocystis hominis succinyl-CoA synthetase
Classification LIGASE
Compound Succinate--CoA ligase [ADP-forming] subunit beta
Source (SUCB_BLAHN)
Sequence A:  MNIHEWQSKQLIQKYGGRAQSGEVAFSPERSRDIAKKLWN
QFPGCEFVVKAQVLAGGRGKGHWEHGMQGGVKLAKTPEEV
YEIANEMIGHKLITKQTGAKGINCNKVMVCGAVDILKEFY
LSILLDRAMGCPVIIATSQGGMGIEEVAQKCPECLFKVPI
SVKNGPTNEQLVKLAKDLGLEGDLVQDCVDNVKALYQVFD
KCDSTMVEINPLGVIETPTDEKVICCLDAKIAFDKDAAF
B:  MNIHEWQSKQLIQKYGGRAQSGEVAFSPERSRDIAKKLWN
QFPGCEFVVKAQVLAGGRGKGHWEHGMQGGVKLAKTPEEV
YEIANEMIGHKLITKQTGAKGINCNKVMVCGAVDILKEFY
LSILLDRAMGCPVIIATSQGGMGIEEVAQKCPECLFKVPI
SVKNGPTNEQLVKLAKDLGLEGDLVQDCVDNVKALYQVFD
KCDSTMVEINPLGVIETPTDEKVICCLDAKIAFD
C:  NIHEWQSKQLIQKYGGRAQSGEVAFSPERSRDIAKKLWNQ
FPGCEFVVKAQVLAGGRGKGHWEHGMQGGVKLAKTPEEVY
EIANEMIGHKLITKQTGAKGINCNKVMVCGAVDILKEFYL
SILLDRAMGCPVIIATSQGGECLFKVPISVKNGPTNEQLV
KLAKDLGLEGDLVQDCVDNVKALYQVFDKCDSTMVEINPL
GVIETPTDEKVICCLDAKIAF
D:  MNIHEWQSKQLIQKYGGRAQSGEVAFSPERSRDIAKKLWN
QFPGCEFVVKAQVLAGGRGKGHWEHGMQGGVKLAKTPEEV
YEIANEMIGHKLITKQTGAKGINCNKVMVCGAVDILKEFY
LSILLDRAMGCPVIIATSQGGMGIEEVAKCPECLFKVPIS
VKNGPTNEQLVKLAKDLGLEGDLVQDCVDNVKALYQVFDK
CDSTMVEINPLGVIETPTDEKVICCLDAKIAFD
Description


Functional site

1) chain A
residue 20
type
sequence Q
description binding site for residue ADP A 301
source : AC1

2) chain A
residue 48
type
sequence V
description binding site for residue ADP A 301
source : AC1

3) chain A
residue 50
type
sequence K
description binding site for residue ADP A 301
source : AC1

4) chain A
residue 57
type
sequence G
description binding site for residue ADP A 301
source : AC1

5) chain A
residue 58
type
sequence R
description binding site for residue ADP A 301
source : AC1

6) chain A
residue 59
type
sequence G
description binding site for residue ADP A 301
source : AC1

7) chain A
residue 111
type
sequence G
description binding site for residue ADP A 301
source : AC1

8) chain A
residue 112
type
sequence A
description binding site for residue ADP A 301
source : AC1

9) chain A
residue 113
type
sequence V
description binding site for residue ADP A 301
source : AC1

10) chain A
residue 115
type
sequence I
description binding site for residue ADP A 301
source : AC1

11) chain A
residue 118
type
sequence E
description binding site for residue ADP A 301
source : AC1

12) chain A
residue 210
type
sequence N
description binding site for residue ADP A 301
source : AC1

13) chain A
residue 211
type
sequence P
description binding site for residue ADP A 301
source : AC1

14) chain A
residue 227
type
sequence L
description binding site for residue ADP A 301
source : AC1

15) chain A
residue 228
type
sequence D
description binding site for residue ADP A 301
source : AC1

16) chain A
residue 210
type
sequence N
description binding site for residue MG A 302
source : AC2

17) chain A
residue 228
type
sequence D
description binding site for residue MG A 302
source : AC2

18) chain B
residue 20
type
sequence Q
description binding site for residue ADP B 301
source : AC3

19) chain B
residue 48
type
sequence V
description binding site for residue ADP B 301
source : AC3

20) chain B
residue 50
type
sequence K
description binding site for residue ADP B 301
source : AC3

21) chain B
residue 57
type
sequence G
description binding site for residue ADP B 301
source : AC3

22) chain B
residue 58
type
sequence R
description binding site for residue ADP B 301
source : AC3

23) chain B
residue 59
type
sequence G
description binding site for residue ADP B 301
source : AC3

24) chain B
residue 111
type
sequence G
description binding site for residue ADP B 301
source : AC3

25) chain B
residue 113
type
sequence V
description binding site for residue ADP B 301
source : AC3

26) chain B
residue 115
type
sequence I
description binding site for residue ADP B 301
source : AC3

27) chain B
residue 118
type
sequence E
description binding site for residue ADP B 301
source : AC3

28) chain B
residue 210
type
sequence N
description binding site for residue ADP B 301
source : AC3

29) chain B
residue 211
type
sequence P
description binding site for residue ADP B 301
source : AC3

30) chain B
residue 227
type
sequence L
description binding site for residue ADP B 301
source : AC3

31) chain B
residue 228
type
sequence D
description binding site for residue ADP B 301
source : AC3

32) chain B
residue 210
type
sequence N
description binding site for residue MG B 302
source : AC4

33) chain B
residue 228
type
sequence D
description binding site for residue MG B 302
source : AC4

34) chain A
residue 114
type
sequence D
description binding site for residue NH4 B 303
source : AC5

35) chain A
residue 216
type
sequence E
description binding site for residue NH4 B 303
source : AC5

36) chain A
residue 220
type
sequence D
description binding site for residue NH4 B 303
source : AC5

37) chain B
residue 218
type
sequence P
description binding site for residue NH4 B 303
source : AC5

38) chain B
residue 220
type
sequence D
description binding site for residue NH4 B 303
source : AC5

39) chain A
residue 218
type
sequence P
description binding site for residue NH4 B 304
source : AC6

40) chain A
residue 220
type
sequence D
description binding site for residue NH4 B 304
source : AC6

41) chain B
residue 114
type
sequence D
description binding site for residue NH4 B 304
source : AC6

42) chain B
residue 216
type
sequence E
description binding site for residue NH4 B 304
source : AC6

43) chain B
residue 217
type
sequence T
description binding site for residue NH4 B 304
source : AC6

44) chain B
residue 220
type
sequence D
description binding site for residue NH4 B 304
source : AC6

45) chain C
residue 20
type
sequence Q
description binding site for residue ADP C 301
source : AC7

46) chain C
residue 48
type
sequence V
description binding site for residue ADP C 301
source : AC7

47) chain C
residue 50
type
sequence K
description binding site for residue ADP C 301
source : AC7

48) chain C
residue 57
type
sequence G
description binding site for residue ADP C 301
source : AC7

49) chain C
residue 58
type
sequence R
description binding site for residue ADP C 301
source : AC7

50) chain C
residue 59
type
sequence G
description binding site for residue ADP C 301
source : AC7

51) chain C
residue 71
type
sequence V
description binding site for residue ADP C 301
source : AC7

52) chain C
residue 111
type
sequence G
description binding site for residue ADP C 301
source : AC7

53) chain C
residue 112
type
sequence A
description binding site for residue ADP C 301
source : AC7

54) chain C
residue 113
type
sequence V
description binding site for residue ADP C 301
source : AC7

55) chain C
residue 115
type
sequence I
description binding site for residue ADP C 301
source : AC7

56) chain C
residue 118
type
sequence E
description binding site for residue ADP C 301
source : AC7

57) chain C
residue 210
type
sequence N
description binding site for residue ADP C 301
source : AC7

58) chain C
residue 211
type
sequence P
description binding site for residue ADP C 301
source : AC7

59) chain C
residue 227
type
sequence L
description binding site for residue ADP C 301
source : AC7

60) chain C
residue 228
type
sequence D
description binding site for residue ADP C 301
source : AC7

61) chain C
residue 210
type
sequence N
description binding site for residue MG C 302
source : AC8

62) chain C
residue 228
type
sequence D
description binding site for residue MG C 302
source : AC8

63) chain C
residue 114
type
sequence D
description binding site for residue NH4 C 303
source : AC9

64) chain C
residue 216
type
sequence E
description binding site for residue NH4 C 303
source : AC9

65) chain C
residue 217
type
sequence T
description binding site for residue NH4 C 303
source : AC9

66) chain C
residue 220
type
sequence D
description binding site for residue NH4 C 303
source : AC9

67) chain D
residue 218
type
sequence P
description binding site for residue NH4 C 303
source : AC9

68) chain D
residue 220
type
sequence D
description binding site for residue NH4 C 303
source : AC9

69) chain D
residue 20
type
sequence Q
description binding site for residue ADP D 301
source : AD1

70) chain D
residue 48
type
sequence V
description binding site for residue ADP D 301
source : AD1

71) chain D
residue 50
type
sequence K
description binding site for residue ADP D 301
source : AD1

72) chain D
residue 57
type
sequence G
description binding site for residue ADP D 301
source : AD1

73) chain D
residue 58
type
sequence R
description binding site for residue ADP D 301
source : AD1

74) chain D
residue 59
type
sequence G
description binding site for residue ADP D 301
source : AD1

75) chain D
residue 71
type
sequence V
description binding site for residue ADP D 301
source : AD1

76) chain D
residue 111
type
sequence G
description binding site for residue ADP D 301
source : AD1

77) chain D
residue 112
type
sequence A
description binding site for residue ADP D 301
source : AD1

78) chain D
residue 113
type
sequence V
description binding site for residue ADP D 301
source : AD1

79) chain D
residue 115
type
sequence I
description binding site for residue ADP D 301
source : AD1

80) chain D
residue 118
type
sequence E
description binding site for residue ADP D 301
source : AD1

81) chain D
residue 210
type
sequence N
description binding site for residue ADP D 301
source : AD1

82) chain D
residue 211
type
sequence P
description binding site for residue ADP D 301
source : AD1

83) chain D
residue 227
type
sequence L
description binding site for residue ADP D 301
source : AD1

84) chain D
residue 228
type
sequence D
description binding site for residue ADP D 301
source : AD1

85) chain D
residue 210
type
sequence N
description binding site for residue MG D 302
source : AD2

86) chain D
residue 228
type
sequence D
description binding site for residue MG D 302
source : AD2

87) chain C
residue 218
type
sequence P
description binding site for residue NH4 D 303
source : AD3

88) chain C
residue 220
type
sequence D
description binding site for residue NH4 D 303
source : AD3

89) chain D
residue 114
type
sequence D
description binding site for residue NH4 D 303
source : AD3

90) chain D
residue 216
type
sequence E
description binding site for residue NH4 D 303
source : AD3

91) chain D
residue 217
type
sequence T
description binding site for residue NH4 D 303
source : AD3

92) chain D
residue 220
type
sequence D
description binding site for residue NH4 D 303
source : AD3

93) chain A
residue 50
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

94) chain B
residue 228
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

95) chain C
residue 50
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

96) chain C
residue 57
type BINDING
sequence G
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

97) chain C
residue 118
type BINDING
sequence E
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

98) chain C
residue 210
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

99) chain C
residue 228
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

100) chain D
residue 50
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

101) chain D
residue 57
type BINDING
sequence G
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

102) chain D
residue 118
type BINDING
sequence E
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

103) chain D
residue 210
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

104) chain A
residue 57
type BINDING
sequence G
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

105) chain D
residue 228
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

106) chain A
residue 118
type BINDING
sequence E
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

107) chain A
residue 210
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

108) chain A
residue 228
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

109) chain B
residue 50
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

110) chain B
residue 57
type BINDING
sequence G
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

111) chain B
residue 118
type BINDING
sequence E
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

112) chain B
residue 210
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_03219
source Swiss-Prot : SWS_FT_FI1

113) chain A
residue 46
type SITE
sequence E
description Important for substrate specificity => ECO:0000305|PubMed:18452512
source Swiss-Prot : SWS_FT_FI2

114) chain A
residue 114
type SITE
sequence D
description Important for substrate specificity => ECO:0000305|PubMed:18452512
source Swiss-Prot : SWS_FT_FI2

115) chain B
residue 46
type SITE
sequence E
description Important for substrate specificity => ECO:0000305|PubMed:18452512
source Swiss-Prot : SWS_FT_FI2

116) chain B
residue 114
type SITE
sequence D
description Important for substrate specificity => ECO:0000305|PubMed:18452512
source Swiss-Prot : SWS_FT_FI2

117) chain C
residue 46
type SITE
sequence E
description Important for substrate specificity => ECO:0000305|PubMed:18452512
source Swiss-Prot : SWS_FT_FI2

118) chain C
residue 114
type SITE
sequence D
description Important for substrate specificity => ECO:0000305|PubMed:18452512
source Swiss-Prot : SWS_FT_FI2

119) chain D
residue 46
type SITE
sequence E
description Important for substrate specificity => ECO:0000305|PubMed:18452512
source Swiss-Prot : SWS_FT_FI2

120) chain D
residue 114
type SITE
sequence D
description Important for substrate specificity => ECO:0000305|PubMed:18452512
source Swiss-Prot : SWS_FT_FI2


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