|
|
eF-site ID
|
6njd-A |
|
PDB Code
|
6njd |
|
Chain
|
A |
|
click to enlarge
|
|
|
Title
|
Crystal structure of RavD (residues 1-200) from Legionella pneumophila (strain Corby) complexed with Met-1 linked di-ubiquitin |
|
Classification
|
HYDROLASE |
|
Compound
|
Di-ubiquitin |
|
Source
|
(6NJD) |
|
|
Sequence
|
A: |
GPLGSMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRS
SMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
|
|
|
Description
|
(1) |
Di-ubiquitin, RavD
|
|
Functional site
|
|
|
1)
|
chain |
A |
| residue |
108 |
| type |
|
| sequence |
D
|
| description |
binding site for residue MG A 201
|
| source |
: AC1
|
|
|
2)
|
chain |
A |
| residue |
27-52 |
| type |
prosite |
| sequence |
KAKIQDKEGIPPDQQRLIFAGKQLED
|
| description |
UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
|
| source |
prosite : PS00299
|
|
|
3)
|
chain |
A |
| residue |
103-128 |
| type |
prosite |
| sequence |
KAKIQDKEGIPPDQQRLIFAGKQLED
|
| description |
UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
|
| source |
prosite : PS00299
|
|
|
|