eF-site ID 6nig-B
PDB Code 6nig
Chain B

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Title Crystal structure of the human TLR2-Diprovocim complex
Classification IMMUNE SYSTEM/AGONIST
Compound Toll-like receptor 2,Variable lymphocyte receptor B
Source (Q2YE02_EPTST)
Sequence B:  SLSCDRNGICKGSSGSLNSIPSGLTEAVKSLDLSNNRITY
ISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD
LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFS
HLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDL
QSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVEC
LELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESL
FQVMKLLNQISGLLELEFDDCTLNGVGNFRASDIDPGKVE
TLTIRRLHIPRFYLFYDLSTLYSLTERVKRITVENSKVFL
VPCLLSQHLKSLEYLDLSENLMVEEYLKNSACEDAWPSLQ
TLILRQNHLASLEKTGETLLTLKNLTNIDISKNSFHSMPE
TCQWPEKMKYLNLSSTRIHSVTGCIPKTLEILDVSNNNLN
LFSLNLPQLKELYISRNKLMTLPDASLLPMLLVLKISRNQ
LKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLN
KNSQKEQGSAKCSGSGKPVRSIICP
Description


Functional site

1) chain B
residue 414
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:17889651
source Swiss-Prot : SWS_FT_FI3

2) chain B
residue 349
type SITE
sequence F
description Interaction with bacterial lipopeptide
source Swiss-Prot : SWS_FT_FI1

3) chain B
residue 114
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:15173186, ECO:0000269|PubMed:17889651
source Swiss-Prot : SWS_FT_FI2

4) chain B
residue 199
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:15173186, ECO:0000269|PubMed:17889651
source Swiss-Prot : SWS_FT_FI2

5) chain B
residue 442
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:15173186, ECO:0000269|PubMed:17889651
source Swiss-Prot : SWS_FT_FI2


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