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eF-site ID
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6nd4-W |
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PDB Code
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6nd4 |
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Chain
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W |
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click to enlarge
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Title
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Conformational switches control early maturation of the eukaryotic small ribosomal subunit |
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Classification
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RIBOSOME |
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Compound
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5'ETS rRNA |
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Source
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ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae BY4741; |
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Sequence
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W: |
DYLLPESNGYLEPENELEKTFKVQQSEIKSSVDVSTANKA
LDLSLKEFGPYHIKYAKNGTHLLITGRKGHVASMDWRKGQ
LRAELFLNETCHSATYLQNEQYFAVAQKKYTFIYDHEGTE
LHRLKQHIEARHLDFLPYHYLLVTAGETGWLKYHDVSTGQ
LVSELRTKAGPTMAMAQNPWNAVMHLGHSNGTVSLWSPSM
PEPLVKLLSARGPVNSIAIDRSGYYMATTGADRSMKIWDI
RNFKQLHSVESLPTPGTNVSISDTGLLALSRGPHVTLWKD
ALKLSGDSKPCFGSMGGNPHRNTPYMSHLFAGNKVENLGF
VPFEDLLGVGHQTGITNLIVPGAGEANYDALELNPFETKK
QRQEQEVRTLLNKLPADTITLDPNS
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Description
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Functional site
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1)
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chain |
W |
| residue |
289-303 |
| type |
prosite |
| sequence |
MATTGADRSMKIWDI
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| description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. IVSAslDsTIRTWDL
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| source |
prosite : PS00678
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2)
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chain |
W |
| residue |
242-252 |
| type |
prosite |
| sequence |
PWNAVMHLGHS
|
| description |
AA_TRNA_LIGASE_I Aminoacyl-transfer RNA synthetases class-I signature. Pw.NAvMHLGHS
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| source |
prosite : PS00178
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