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eF-site ID
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6nd4-Q |
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PDB Code
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6nd4 |
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Chain
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Q |
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click to enlarge
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Title
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Conformational switches control early maturation of the eukaryotic small ribosomal subunit |
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Classification
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RIBOSOME |
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Compound
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5'ETS rRNA |
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Source
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ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae BY4741; |
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Sequence
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Q: |
YQRFEQAAAFGVIASNANCVWIPAPGQLITSALEDVNIWD
IKTGDLVSKLSDGLPPGASDARGAKPAECTYLEAHKDTDL
LAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTG
TRLISGSKDSNIIVWDLVGEVGLYKLRSHKDSITGFWCQG
EDWLISTSKDGMIKLWDLKTHQCIETHIAHTGECWGLAVK
DDLLITTGTDSQVKIWKLDIENDKMGGKLTEMGIFEKQSK
QRGLKIEFITNSFFYIQNADKTIETFRIRKEEEIARGLKK
REKRLKEXXXXXXXXXXYSSFILHPFQTIRSLYKIKSASW
TTVSSSKLELVLTTSSNTIEYYSIPYEKRDPTSPAPLKTH
TIELQGQRTDVRSIDISDDNKLLATASNGSLKIWNIKTHK
CIRTFECGYALTCKFLPGGLLVILGTRNGELQLFDLASSS
LLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKTVKFWDFK
VLKLHHDTTLELTDDILCVRVSPDDRYLAISLLDNTVKVF
FLDSMKFYLSLYGHKLPVLSIDISFDSKMIITSSADKNIK
IWGLDFGDCHKSLFAHQDSIMNVKFLPQSHNFFSCSKDAV
VKYWDGEKFECIQKLYAHQSEVWALAVATDGGFVVSSSHD
HSIRIWEETEDXXXXXXXXXXXXXXXXXXXXXXXXXSGVH
KQTLESLKAGERLMEALDLGIAEIEGLEAYNRDMKLWQRK
KLGEAPIKPQGNAVLIAVNKTPEQYIMDTLLRIRMSQLED
ALMVMPFSYVLKFLKFIDTVMQNKTLLHSHLPLICKNLFF
IIKFNHKELVSQKNEELKLQINRVKTELRSALKSTEDDLG
FNVQGLKFVKQQWNLRHNYEFV
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Description
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Functional site
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1)
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chain |
Q |
| residue |
488-502 |
| type |
prosite |
| sequence |
LVTGSADKTVKFWDF
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| description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. MATTgaDrSMKIWDI
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| source |
prosite : PS00678
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2)
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chain |
Q |
| residue |
136-150 |
| type |
prosite |
| sequence |
LISGSKDSNIIVWDL
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| description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. MATTgaDrSMKIWDI
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| source |
prosite : PS00678
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3)
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chain |
Q |
| residue |
177-191 |
| type |
prosite |
| sequence |
LISTSKDGMIKLWDL
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| description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. MATTgaDrSMKIWDI
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| source |
prosite : PS00678
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4)
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chain |
Q |
| residue |
405-419 |
| type |
prosite |
| sequence |
LLATASNGSLKIWNI
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| description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. MATTgaDrSMKIWDI
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| source |
prosite : PS00678
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