|
|
eF-site ID
|
6nd4-O |
|
PDB Code
|
6nd4 |
|
Chain
|
O |
|
click to enlarge
|
|
|
Title
|
Conformational switches control early maturation of the eukaryotic small ribosomal subunit |
|
Classification
|
RIBOSOME |
|
Compound
|
5'ETS rRNA |
|
Source
|
ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae BY4741; |
|
|
Sequence
|
O: |
KSDFKFSNLLGTVYRQGNITFSDDGKQLLSPVGNRVSVFD
LINNKSFTFEYEHRKNIAAIDLNKQGTLLISIDEDGRAIL
VNFKARNVLHHFNFKEKCSAVKFSPDGRLFALASGRFLQI
WKTPDVNKDRQFAPFVRHRVHAGHFQDITSLTWSQDSRFI
LTTSKDLSAKIWSVDSEEKNLAATTFNGHRDYVMGAFFSH
DQEKIYTVSKDGAVFVWEFTKRKYSWRITKKHFFYANQAK
VKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQ
NPVNTVSVNQTGEWLAFGSSKLGQLLVYEWQSESYILKQQ
GHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLAT
FEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNF
RTFTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQT
GQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSI
FGRSQQVEPIEVYSDVLALSMRPDGKEVAVSTLKGQISIF
NIEDAKQVGNIDCRKDIISGRFNQDRFTAKNSERSKFFTT
IHYSFDGMAIVAGGNNNSICLYDVPNEVLLKRFIVSRNMA
LNGTLEFLNSKKMTEAGSLDLIDDAGENSDLEDRIDNSLP
GSQRGGDLSTRKMRPEVRVTSVQFSPTANAFAAASTEGLL
IYSTNDTILFDPFDLDVTPHSTVEALREKQFLNALVMAFR
LNEEYLINKVYEAIPIKEIPLVASNIPAIYLPRILKFIGD
FAIESQHIEFNLIWIKALLSASGGYINEHKYLFSTAMRSI
QRFIVRVAKEVVNTTTDNKYTYRFLVSTDGSM
|
|
|
Description
|
|
Functional site
|
|
|
1)
|
chain |
O |
| residue |
206-220 |
| type |
prosite |
| sequence |
IYTVSKDGAVFVWEF
|
| description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. MATTgaDrSMKIWDI
|
| source |
prosite : PS00678
|
|
|
2)
|
chain |
O |
| residue |
360-374 |
| type |
prosite |
| sequence |
VVTASEDGKIKVWDI
|
| description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. MATTgaDrSMKIWDI
|
| source |
prosite : PS00678
|
|
|
3)
|
chain |
O |
| residue |
402-416 |
| type |
prosite |
| sequence |
MFSSSLDGTVRAWDL
|
| description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. MATTgaDrSMKIWDI
|
| source |
prosite : PS00678
|
|
|
|