eF-site ID 6nd4-O
PDB Code 6nd4
Chain O

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Title Conformational switches control early maturation of the eukaryotic small ribosomal subunit
Classification RIBOSOME
Compound 5'ETS rRNA
Source ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae BY4741;
Sequence O:  KSDFKFSNLLGTVYRQGNITFSDDGKQLLSPVGNRVSVFD
LINNKSFTFEYEHRKNIAAIDLNKQGTLLISIDEDGRAIL
VNFKARNVLHHFNFKEKCSAVKFSPDGRLFALASGRFLQI
WKTPDVNKDRQFAPFVRHRVHAGHFQDITSLTWSQDSRFI
LTTSKDLSAKIWSVDSEEKNLAATTFNGHRDYVMGAFFSH
DQEKIYTVSKDGAVFVWEFTKRKYSWRITKKHFFYANQAK
VKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQ
NPVNTVSVNQTGEWLAFGSSKLGQLLVYEWQSESYILKQQ
GHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLAT
FEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNF
RTFTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQT
GQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSI
FGRSQQVEPIEVYSDVLALSMRPDGKEVAVSTLKGQISIF
NIEDAKQVGNIDCRKDIISGRFNQDRFTAKNSERSKFFTT
IHYSFDGMAIVAGGNNNSICLYDVPNEVLLKRFIVSRNMA
LNGTLEFLNSKKMTEAGSLDLIDDAGENSDLEDRIDNSLP
GSQRGGDLSTRKMRPEVRVTSVQFSPTANAFAAASTEGLL
IYSTNDTILFDPFDLDVTPHSTVEALREKQFLNALVMAFR
LNEEYLINKVYEAIPIKEIPLVASNIPAIYLPRILKFIGD
FAIESQHIEFNLIWIKALLSASGGYINEHKYLFSTAMRSI
QRFIVRVAKEVVNTTTDNKYTYRFLVSTDGSM
Description


Functional site

1) chain O
residue 206-220
type prosite
sequence IYTVSKDGAVFVWEF
description WD_REPEATS_1 Trp-Asp (WD) repeats signature. MATTgaDrSMKIWDI
source prosite : PS00678

2) chain O
residue 360-374
type prosite
sequence VVTASEDGKIKVWDI
description WD_REPEATS_1 Trp-Asp (WD) repeats signature. MATTgaDrSMKIWDI
source prosite : PS00678

3) chain O
residue 402-416
type prosite
sequence MFSSSLDGTVRAWDL
description WD_REPEATS_1 Trp-Asp (WD) repeats signature. MATTgaDrSMKIWDI
source prosite : PS00678


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