eF-site ID 6nc6-AB
PDB Code 6nc6
Chain A, B

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Title Lipid II flippase MurJ, inward closed conformation
Classification TRANSPORT PROTEIN
Compound Lipid II flippase MurJ
Source (MURJ_THEAB)
Sequence A:  LFSSILFSIATFFSRILGLFRDVLFAKYFGVSYELDAYFI
AIMFPFFLRKVFGEGAMSSAFVPLYSEKSGEEKDKFLSSV
INGFSLIILALVILSYFFPELIINLFGAGSSHETKILAKK
LLLITSPSIYFIFLWAISYSILNTNNKFFWPALTPSISNI
TIIIGTFLSTKYGIISPTIGFLIGSILMFFSIIKSIIKHK
YYFTIKHFPHFLKLFFPTFMTMVVSQINTVVDMNVVSFYD
KGSISYLQYASRFYLLPYGLFAVSVSTVVLSKISNDRKNF
NYHLNDALKTTLFFTIPSMVGLIFLSTPIIRFFYEHGAFT
SKDTLITSKILIAYTLGLPFYGIYSTISRSYHAIKNTKTP
FIAATIVSLSNIILDIIFGLKYGPIGVALATSIAGIIGVL
YLLFSVKTFPIKDFLKISLNSLIMLFVIYLTDFTDNEFWF
LIQILIGILVYLIFSSIFYRDLIRRF
B:  SILFSIATFFSRILGLFRDVLFAKYFGVSYELDAYFIAIM
FPFFLRKVFGEGAMSSAFVPLYSEKSGEEKDKFLSSVING
FSLIILALVILSYFFPELIINLFGAGSSHETKILAKKLLL
ITSPSIYFIFLWAISYSILNTNNKFFWPALTPSISNITII
IGTFLSTKYGIISPTIGFLIGSILMFFSIIKSIIKHKYYF
TIKHFPHFLKLFFPTFMTMVVSQINTVVDMNVVSFYDKGS
ISYLQYASRFYLLPYGLFAVSVSTVVLSKISNDRKNFNYH
LNDALKTTLFFTIPSMVGLIFLSTPIIRFFYEHGAFTSKD
TLITSKILIAYTLGLPFYGIYSTISRSYHAIKNTKTPFIA
ATIVSLSNIILDIIFGLKYGPIGVALATSIAGIIGVLYLL
FSVKTFPIKDFLKISLNSLIMLFVIYLTDFTDNEFWFLIQ
ILIGILVYLIFSSIFYRDLIR
Description


Functional site

1) chain A
residue 235
type
sequence D
description binding site for residue NA A 501
source : AC1

2) chain A
residue 374
type
sequence N
description binding site for residue NA A 501
source : AC1

3) chain A
residue 378
type
sequence D
description binding site for residue NA A 501
source : AC1

4) chain A
residue 390
type
sequence V
description binding site for residue NA A 501
source : AC1

5) chain A
residue 393
type
sequence A
description binding site for residue NA A 501
source : AC1

6) chain A
residue 394
type
sequence T
description binding site for residue NA A 501
source : AC1

7) chain A
residue 41
type
sequence Y
description binding site for residue CL A 502
source : AC2

8) chain A
residue 45
type
sequence I
description binding site for residue CL A 502
source : AC2

9) chain A
residue 255
type
sequence R
description binding site for residue CL A 502
source : AC2

10) chain A
residue 71
type
sequence K
description binding site for residue CL A 503
source : AC3

11) chain A
residue 210
type
sequence H
description binding site for residue CL A 503
source : AC3

12) chain A
residue 213
type
sequence H
description binding site for residue CL A 503
source : AC3

13) chain A
residue 210
type
sequence H
description binding site for residue CL A 504
source : AC4

14) chain A
residue 213
type
sequence H
description binding site for residue CL A 504
source : AC4

15) chain A
residue 210
type
sequence H
description binding site for residue ZN A 505
source : AC5

16) chain A
residue 213
type
sequence H
description binding site for residue ZN A 505
source : AC5

17) chain A
residue 175
type
sequence Y
description binding site for residue OLB A 506
source : AC6

18) chain A
residue 178
type
sequence I
description binding site for residue OLB A 506
source : AC6

19) chain A
residue 179
type
sequence S
description binding site for residue OLB A 506
source : AC6

20) chain A
residue 182
type
sequence I
description binding site for residue OLB A 506
source : AC6

21) chain A
residue 183
type
sequence G
description binding site for residue OLB A 506
source : AC6

22) chain B
residue 70
type
sequence E
description binding site for residue OLB A 506
source : AC6

23) chain B
residue 41
type
sequence Y
description binding site for residue CL B 501
source : AC7

24) chain B
residue 255
type
sequence R
description binding site for residue CL B 501
source : AC7

25) chain B
residue 71
type
sequence K
description binding site for residue CL B 502
source : AC8

26) chain B
residue 210
type
sequence H
description binding site for residue CL B 502
source : AC8

27) chain B
residue 213
type
sequence H
description binding site for residue CL B 502
source : AC8

28) chain B
residue 71
type
sequence K
description binding site for residue CL B 503
source : AC9

29) chain B
residue 210
type
sequence H
description binding site for residue CL B 503
source : AC9

30) chain B
residue 210
type
sequence H
description binding site for residue ZN B 504
source : AD1

31) chain B
residue 213
type
sequence H
description binding site for residue ZN B 504
source : AD1

32) chain B
residue 57-78
type TOPO_DOM
sequence EGAMSSAFVPLYSEKSGEEKDK
description Cytoplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI1

33) chain B
residue 145-150
type TOPO_DOM
sequence LNTNNK
description Cytoplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI1

34) chain B
residue 197-213
type TOPO_DOM
sequence KSIIKHKYYFTIKHFPH
description Cytoplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI1

35) chain B
residue 272-287
type TOPO_DOM
sequence VLSKISNDRKNFNYHL
description Cytoplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI1

36) chain B
residue 354-362
type TOPO_DOM
sequence YHAIKNTKT
description Cytoplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI1

37) chain B
residue 408-416
type TOPO_DOM
sequence SVKTFPIKD
description Cytoplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI1

38) chain A
residue 57-78
type TOPO_DOM
sequence EGAMSSAFVPLYSEKSGEEKDK
description Cytoplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI1

39) chain A
residue 145-150
type TOPO_DOM
sequence LNTNNK
description Cytoplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI1

40) chain A
residue 197-213
type TOPO_DOM
sequence KSIIKHKYYFTIKHFPH
description Cytoplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI1

41) chain A
residue 272-287
type TOPO_DOM
sequence VLSKISNDRKNFNYHL
description Cytoplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI1

42) chain A
residue 354-362
type TOPO_DOM
sequence YHAIKNTKT
description Cytoplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI1

43) chain A
residue 408-416
type TOPO_DOM
sequence SVKTFPIKD
description Cytoplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI1

44) chain A
residue 333-353
type TRANSMEM
sequence ILIAYTLGLPFYGIYSTISRS
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

45) chain A
residue 363-383
type TRANSMEM
sequence PFIAATIVSLSNIILDIIFGL
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

46) chain A
residue 387-407
type TRANSMEM
sequence PIGVALATSIAGIIGVLYLLF
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

47) chain A
residue 417-437
type TRANSMEM
sequence FLKISLNSLIMLFVIYLTDFT
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

48) chain A
residue 441-461
type TRANSMEM
sequence FWFLIQILIGILVYLIFSSIF
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

49) chain B
residue 36-56
type TRANSMEM
sequence YELDAYFIAIMFPFFLRKVFG
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

50) chain B
residue 79-99
type TRANSMEM
sequence FLSSVINGFSLIILALVILSY
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

51) chain B
residue 124-144
type TRANSMEM
sequence LLLITSPSIYFIFLWAISYSI
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

52) chain B
residue 151-171
type TRANSMEM
sequence FFWPALTPSISNITIIIGTFL
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

53) chain A
residue 36-56
type TRANSMEM
sequence YELDAYFIAIMFPFFLRKVFG
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

54) chain B
residue 176-196
type TRANSMEM
sequence GIISPTIGFLIGSILMFFSII
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

55) chain B
residue 214-238
type TRANSMEM
sequence FLKLFFPTFMTMVVSQINTVVDMNV
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

56) chain B
residue 250-271
type TRANSMEM
sequence LQYASRFYLLPYGLFAVSVSTV
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

57) chain B
residue 288-308
type TRANSMEM
sequence NDALKTTLFFTIPSMVGLIFL
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

58) chain B
residue 333-353
type TRANSMEM
sequence ILIAYTLGLPFYGIYSTISRS
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

59) chain B
residue 363-383
type TRANSMEM
sequence PFIAATIVSLSNIILDIIFGL
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

60) chain B
residue 387-407
type TRANSMEM
sequence PIGVALATSIAGIIGVLYLLF
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

61) chain B
residue 417-437
type TRANSMEM
sequence FLKISLNSLIMLFVIYLTDFT
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

62) chain B
residue 441-461
type TRANSMEM
sequence FWFLIQILIGILVYLIFSSIF
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

63) chain A
residue 79-99
type TRANSMEM
sequence FLSSVINGFSLIILALVILSY
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

64) chain A
residue 124-144
type TRANSMEM
sequence LLLITSPSIYFIFLWAISYSI
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

65) chain A
residue 151-171
type TRANSMEM
sequence FFWPALTPSISNITIIIGTFL
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

66) chain A
residue 176-196
type TRANSMEM
sequence GIISPTIGFLIGSILMFFSII
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

67) chain A
residue 214-238
type TRANSMEM
sequence FLKLFFPTFMTMVVSQINTVVDMNV
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

68) chain A
residue 250-271
type TRANSMEM
sequence LQYASRFYLLPYGLFAVSVSTV
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

69) chain A
residue 288-308
type TRANSMEM
sequence NDALKTTLFFTIPSMVGLIFL
description Helical => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI2

70) chain A
residue 24-35
type TOPO_DOM
sequence RDVLFAKYFGVS
description Periplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI3

71) chain B
residue 172-175
type TOPO_DOM
sequence STKY
description Periplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI3

72) chain B
residue 239-249
type TOPO_DOM
sequence VSFYDKGSISY
description Periplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI3

73) chain B
residue 309-332
type TOPO_DOM
sequence STPIIRFFYEHGAFTSKDTLITSK
description Periplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI3

74) chain B
residue 384-386
type TOPO_DOM
sequence KYG
description Periplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI3

75) chain B
residue 438-440
type TOPO_DOM
sequence DNE
description Periplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI3

76) chain A
residue 100-123
type TOPO_DOM
sequence FFPELIINLFGAGSSHETKILAKK
description Periplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI3

77) chain A
residue 172-175
type TOPO_DOM
sequence STKY
description Periplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI3

78) chain A
residue 239-249
type TOPO_DOM
sequence VSFYDKGSISY
description Periplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI3

79) chain A
residue 309-332
type TOPO_DOM
sequence STPIIRFFYEHGAFTSKDTLITSK
description Periplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI3

80) chain A
residue 384-386
type TOPO_DOM
sequence KYG
description Periplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI3

81) chain A
residue 438-440
type TOPO_DOM
sequence DNE
description Periplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI3

82) chain B
residue 24-35
type TOPO_DOM
sequence RDVLFAKYFGVS
description Periplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI3

83) chain B
residue 100-123
type TOPO_DOM
sequence FFPELIINLFGAGSSHETKILAKK
description Periplasmic => ECO:0000269|PubMed:28024149
source Swiss-Prot : SWS_FT_FI3


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