eF-site ID 6nb4-A
PDB Code 6nb4
Chain A

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Title MERS-CoV S complex with human neutralizing LCA60 antibody Fab fragment (state 2)
Classification VIRUS
Compound Spike glycoprotein
Source (6NB4)
Sequence A:  TVDVGPDSVKSACIEVDIQQTFFDKTWPRPIDVSKADGII
YPQGRTYSNITITYQGLFPYQGDHGDMYVYSAGHATGTTP
QKLFVANYSQDVKQFANGFVVRIGAAANSTGTVIISPSTS
ATIRKIYPAFMLGSSVGNFSDGKMGRFFNHTLVLLPDGCG
TLLRAFYCILEPRSGNHCPAGNSYTSFATYHTPATDCSDG
NYNRNASLNSFKEYFNLRNCTFMYTYNITEDEILEWFGIT
QTAQGVHLFSSRYVDLYGGNMFQFATLPVYDTIKYYSIIP
HSIRSIQSDRKAWAAFYVYKLQPLTFLLDFSVDGYIRRAI
DCGFNDLSQLHCSYESFDVESGVYSVSSFEAKPSGSVVEQ
AEGVECDFSPLLSGTPPQVYNFKRLVFTNCNYNLTKLLSL
FSVNDFTCSQISPAAIASNCYSSLILDYFSYPLSMKSDLS
VSSAGPISQFNYKQSFSNPTCLILATVPHNLTTITKPLKY
SYINKCSRLLSDDRTEVPQLVNANQYSPCVSIVPSTVWED
GDYYRKQLSPLEGGGWLVASGSTVAMTEQLQMGFGITVQY
GTDTNSVCPKLEFANDTKIASQLGNCVEYSLYGVSGRGVF
QNCTAVGVRQQRFVYDAYQNLVGYYSDDGNYYCLRACVSV
PVSVIYDKETKTHATLFGSVACEHISSTMSQYSRYGPLQT
PVGCVLGLVNSSLFVEDCKLPLGQSLCALPDTPPGEMRLA
SIAFNHPIQVDQLNSSYFKLSIPTNFSFGVTQEYIQTTIQ
KVTVDCKQYVCNGFQKCEQLLREYGQFCSKINQALHGANL
RQDDSVRNLFASVKSSQSSPIIPGFGGDFNLTLLEPVSAR
SAIEDLLFDKVTIADPGYMQGYDDCMQQGPASARDLICAQ
YVAGYKVLPPLMDVNMEAAYTSSLLGSIAGVGWTAGLSSF
AAIPFAQSIFYRLNGVGITQQVLSENQKLIANKFNQALGA
MQTGFTTTNEAFQKVQDAVNNNAQALSKLASELSNTFGAI
SASIGDIIQRLDPPEQDAQIDRLINGRLTTLNAFVAQQLV
RSESAALSAQLAKDKVNECVKAQSKRSGFCGQGTHIVSFV
VNAPNGLYFMHVGYYPSNHIEVVSAYGLCDAANPTNCIAP
VNGYFIKTNEWSYTGSSFYAPEPITSLNTKYVAPQVTYQN
ISTNLPPPL
Description (1)  Spike glycoprotein, LCA60 heavy chain, LCA60 light chain

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