eF-site ID 6n9d-AB
PDB Code 6n9d
Chain A, B

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Title Complex of tissue inhibitor of metalloproteinases-1 (TIMP-1) mutant (L34G/L133P/L151C/G154A) with matrix metalloproteinase-3 catalytic domain (MMP-3cd)
Classification HYDROLASE/HYDROLASE inhibitor
Compound Stromelysin-1
Source (TIMP1_HUMAN)
Sequence A:  PGIPKWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEE
VTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAH
AYAPGPGINGDAHFDDDEQWTKDTTGTNLFLVAAHEIGHS
LGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLY
G
B:  CTCVPPHPQTAFCNSDLVIRAKFVGTPEVNQTTGYQRYEI
KMTKMYKGFQALDIRFVYTPAMESVCGYFHRSHNRSEEFL
IAGKLQDGLLHITTCSFVAPWNSLSLAQRRGFTKTYTVGC
EECTVFPCPSIPCKLQSGTHCLWTDQCLQASEKGFQSRHL
ACLPREPGLCTWQSL
Description


Functional site

1) chain A
residue 158
type
sequence D
description binding site for residue CA A 301
source : AC1

2) chain A
residue 159
type
sequence G
description binding site for residue CA A 301
source : AC1

3) chain A
residue 161
type
sequence G
description binding site for residue CA A 301
source : AC1

4) chain A
residue 163
type
sequence V
description binding site for residue CA A 301
source : AC1

5) chain A
residue 181
type
sequence D
description binding site for residue CA A 301
source : AC1

6) chain A
residue 184
type
sequence E
description binding site for residue CA A 301
source : AC1

7) chain A
residue 105
type
sequence T
description binding site for residue CA A 302
source : AC2

8) chain A
residue 107
type
sequence D
description binding site for residue CA A 302
source : AC2

9) chain A
residue 182
type
sequence D
description binding site for residue CA A 302
source : AC2

10) chain A
residue 184
type
sequence E
description binding site for residue CA A 302
source : AC2

11) chain A
residue 151
type
sequence H
description binding site for residue ZN A 303
source : AC3

12) chain A
residue 153
type
sequence D
description binding site for residue ZN A 303
source : AC3

13) chain A
residue 166
type
sequence H
description binding site for residue ZN A 303
source : AC3

14) chain A
residue 179
type
sequence H
description binding site for residue ZN A 303
source : AC3

15) chain A
residue 201
type
sequence H
description binding site for residue ZN A 304
source : AC4

16) chain A
residue 205
type
sequence H
description binding site for residue ZN A 304
source : AC4

17) chain A
residue 211
type
sequence H
description binding site for residue ZN A 304
source : AC4

18) chain B
residue 1
type
sequence C
description binding site for residue ZN A 304
source : AC4

19) chain A
residue 140
type
sequence A
description binding site for residue CA A 305
source : AC5

20) chain A
residue 141
type
sequence D
description binding site for residue CA A 305
source : AC5

21) chain A
residue 173
type
sequence G
description binding site for residue CA A 305
source : AC5

22) chain A
residue 175
type
sequence N
description binding site for residue CA A 305
source : AC5

23) chain A
residue 177
type
sequence D
description binding site for residue CA A 305
source : AC5

24) chain A
residue 198-207
type prosite
sequence VAAHEIGHSL
description ZINC_PROTEASE Neutral zinc metallopeptidases, zinc-binding region signature. VAAHEIGHSL
source prosite : PS00142

25) chain B
residue 1-13
type prosite
sequence CTCVPPHPQTAFC
description TIMP Tissue inhibitors of metalloproteinases signature. CtCvPpHPQtaFC
source prosite : PS00288

26) chain A
residue 201
type catalytic
sequence H
description 591
source MCSA : MCSA1

27) chain A
residue 202
type catalytic
sequence E
description 591
source MCSA : MCSA1

28) chain A
residue 205
type catalytic
sequence H
description 591
source MCSA : MCSA1

29) chain A
residue 211
type catalytic
sequence H
description 591
source MCSA : MCSA1

30) chain B
residue 1
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:22427646
source Swiss-Prot : SWS_FT_FI1

31) chain A
residue 173
type SITE
sequence G
description Involved in metalloproteinase-binding => ECO:0000269|PubMed:22427646, ECO:0007744|PDB:3V96
source Swiss-Prot : SWS_FT_FI2

32) chain A
residue 175
type SITE
sequence N
description Involved in metalloproteinase-binding => ECO:0000269|PubMed:22427646, ECO:0007744|PDB:3V96
source Swiss-Prot : SWS_FT_FI2

33) chain A
residue 177
type SITE
sequence D
description Involved in metalloproteinase-binding => ECO:0000269|PubMed:22427646, ECO:0007744|PDB:3V96
source Swiss-Prot : SWS_FT_FI2

34) chain A
residue 179
type SITE
sequence H
description Involved in metalloproteinase-binding => ECO:0000269|PubMed:22427646, ECO:0007744|PDB:3V96
source Swiss-Prot : SWS_FT_FI2

35) chain A
residue 181
type SITE
sequence D
description Involved in metalloproteinase-binding => ECO:0000269|PubMed:22427646, ECO:0007744|PDB:3V96
source Swiss-Prot : SWS_FT_FI2

36) chain A
residue 182
type SITE
sequence D
description Involved in metalloproteinase-binding => ECO:0000269|PubMed:22427646, ECO:0007744|PDB:3V96
source Swiss-Prot : SWS_FT_FI2

37) chain A
residue 184
type SITE
sequence E
description Involved in metalloproteinase-binding => ECO:0000269|PubMed:22427646, ECO:0007744|PDB:3V96
source Swiss-Prot : SWS_FT_FI2

38) chain A
residue 151
type SITE
sequence H
description Involved in metalloproteinase-binding => ECO:0000269|PubMed:22427646, ECO:0007744|PDB:3V96
source Swiss-Prot : SWS_FT_FI2

39) chain A
residue 153
type SITE
sequence D
description Involved in metalloproteinase-binding => ECO:0000269|PubMed:22427646, ECO:0007744|PDB:3V96
source Swiss-Prot : SWS_FT_FI2

40) chain A
residue 158
type SITE
sequence D
description Involved in metalloproteinase-binding => ECO:0000269|PubMed:22427646, ECO:0007744|PDB:3V96
source Swiss-Prot : SWS_FT_FI2

41) chain A
residue 159
type SITE
sequence G
description Involved in metalloproteinase-binding => ECO:0000269|PubMed:22427646, ECO:0007744|PDB:3V96
source Swiss-Prot : SWS_FT_FI2

42) chain A
residue 161
type SITE
sequence G
description Involved in metalloproteinase-binding => ECO:0000269|PubMed:22427646, ECO:0007744|PDB:3V96
source Swiss-Prot : SWS_FT_FI2

43) chain A
residue 163
type SITE
sequence V
description Involved in metalloproteinase-binding => ECO:0000269|PubMed:22427646, ECO:0007744|PDB:3V96
source Swiss-Prot : SWS_FT_FI2

44) chain A
residue 166
type SITE
sequence H
description Involved in metalloproteinase-binding => ECO:0000269|PubMed:22427646, ECO:0007744|PDB:3V96
source Swiss-Prot : SWS_FT_FI2

45) chain B
residue 34
type SITE
sequence G
description Involved in metalloproteinase-binding => ECO:0000269|PubMed:22427646, ECO:0007744|PDB:3V96
source Swiss-Prot : SWS_FT_FI2

46) chain B
residue 135
type SITE
sequence I
description Involved in metalloproteinase-binding => ECO:0000269|PubMed:22427646, ECO:0007744|PDB:3V96
source Swiss-Prot : SWS_FT_FI2

47) chain A
residue 211
type MOD_RES
sequence H
description Phosphoserine; by FAM20C => ECO:0000269|PubMed:26091039
source Swiss-Prot : SWS_FT_FI3

48) chain A
residue 205
type MOD_RES
sequence H
description Phosphoserine; by FAM20C => ECO:0000269|PubMed:26091039
source Swiss-Prot : SWS_FT_FI3

49) chain B
residue 155
type MOD_RES
sequence S
description Phosphoserine; by FAM20C => ECO:0000269|PubMed:26091039
source Swiss-Prot : SWS_FT_FI3

50) chain B
residue 30
type CARBOHYD
sequence N
description N-linked (GlcNAc...) (complex) asparagine => ECO:0000269|PubMed:16263699, ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:16740002, ECO:0000269|PubMed:19139490
source Swiss-Prot : SWS_FT_FI4

51) chain B
residue 78
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:16740002
source Swiss-Prot : SWS_FT_FI5


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