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eF-site ID
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6n8m-p |
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PDB Code
|
6n8m |
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Chain
|
p |
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click to enlarge
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Title
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Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunit |
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Classification
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RIBOSOME |
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Compound
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Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA |
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Source
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ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); |
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Sequence
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p: |
SINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANT
PVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVG
VVSILEAGDSDILTTL
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Description
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(1) |
pre-60S ribosomal subunit
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Functional site
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1)
|
chain |
p |
| residue |
53 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N,N-dimethylproline; by NTM1 => ECO:0000269|PubMed:18957409, ECO:0000269|PubMed:20481588
|
| source |
Swiss-Prot : SWS_FT_FI1
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2)
|
chain |
p |
| residue |
83 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N,N-dimethylproline; by NTM1 => ECO:0000269|PubMed:18957409, ECO:0000269|PubMed:20481588
|
| source |
Swiss-Prot : SWS_FT_FI1
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3)
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chain |
p |
| residue |
20-44 |
| type |
prosite |
| sequence |
SGKYTLGYKSTVKSLRQGKSKLIII
|
| description |
RIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkytlGyKstVKslRqGksKlIII
|
| source |
prosite : PS00709
|
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4)
|
chain |
p |
| residue |
76-96 |
| type |
prosite |
| sequence |
ELGTAVGKLFRVGVVSILEAG
|
| description |
RIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. ELGTavGKlfrvgvVsIlEaG
|
| source |
prosite : PS00993
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