|
eF-site ID
|
6n8m-DEFGHIJKLMNOQRSVXYabcdefghijklmnopqrstuvwxyz |
|
PDB Code
|
6n8m |
|
Chain
|
D, E, F, G, H, I, J, K, L, M, N, O, Q, R, S, V, X, Y, a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, q, r, s, t, u, v, w, x, y, z |
|
|
|
|
Title
|
Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunit |
|
Classification
|
RIBOSOME |
|
Compound
|
Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA |
|
Source
|
ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); |
|
|
Sequence
|
D: |
GRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYI
RGIVKQIVHDSGRGAPLAKVVFRDPYKYRLREEIFIANEG
VHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPG
DRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSD
ARGVIGVIAGGGRVDKPLLKAGRAFHKYRLKRNSWPKTRG
VAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR
RTGLLR
|
| E: |
SHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPV
ALTSFLGYKAGMTTIVRDLDRPGSKFHKREVVEAVTVVDT
PPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN
WYKSKKKAFTKYSAKYAQDGAGIERELARIKKYASVVRVL
VHTQIRKTPLAQKKAHLAEIQLNGGSISEKVDWAREHFEK
TVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRK
THRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHK
IYRVGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDF
IMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDT
ASKFGKGRFQTPAEKHAFMGTLKK
|
| F: |
SRPQVTVHSLTGEATANALPLPAVFSAPIRPDIVHTVFTS
VNKNKRQAYAVSEKAGHQTSAESWGTGRAVARIPRVGGGG
TGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYA
TASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQK
TKEAVAALKAVGAHSDLLKVLKSKKLRAGKGKYRNRRWTQ
RRGPLVVYAEDNGIVKALRNVPGVETANVASLNLLQLAPG
AHLGRFVIWTEAAFTKLDQVWGSETVASSKVGYTLPSHII
STSDVTRIINSSEIQSAIRPAGQATQKRTHVLKKNPLKNK
QVLLRLNPYAKVFAAEKLGSKKAEKTGTKPAAVFTETLKH
D
|
| G: |
AKSSAYSSRFQTPFRRRREGKTDYYQRKRLVTQHKAKYNT
PKYRLVVRFTNKDIICQIISSTITGDVVLAAAYSHELPRY
GITHGLTNWAAAYATGLLIARRTLQKLGLDETYKGVEEVE
GEYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGA
SDGGLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQ
YMEELADDDEERFSELFKGYLADDIDADSLEDIYTSAHEA
IRADPAFKPTEKKFTKEQYAAESKKYRQTKLSKEERAARV
AA
|
| H: |
SAQKAPKWYPSEDVAALKKTRKAARPQKLRASLVPGTVLI
LLAGRFRGKRVVYLKHLEDNTLLISGPFKVNGVPLRRVNA
RYVIATSTKVSVEGVNVEKFNVEYFAKEIKAERVEDQKVV
DKALIAEIKKTPLLKQYLSASFSLKNGDKPHMLKF
|
| I: |
QVAAERAARKAANKEKRAIILERNAAYQKEYETAERNIIQ
AKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKVLQ
LLRLTRINSGTFVKVTKATLELLKLIEPYVAYGYPSYSTI
RQLVYKRGFGKINKQRVPLSDNAIIEANLGKYGILSIDDL
IHEIITVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFI
QGGSFGNREEFINKLVKSMN
|
| J: |
NPLTHSTPKNFGIGQAVQPKRNLSRYVKWPEYVRVQRQKK
ILSIRLKVPPTIAQFQYTLDRNTAAETFKLFNKYRPETAA
EKKERLTKEAAAVAEGKSKQDASPKPYAVKYGLNHVVALI
ENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGK
ARLGTLVNQKTSAVAALTEVRAEDEAALAKLVSTIDANFA
DKYDEVKKHWGGGILGNKAQAKMDKRA
|
| K: |
MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKH
IDVTFTKVNNQLIKVAVHNGGRKHVAALRTVKSLVDNMIT
GVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD
KKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAAD
LQQICRVRNKDIRKFLDGIYVSHKGFIT
|
| L: |
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA
TKEFKGIKVTVQLKIQNRQAAASVVPSASSLVITALKEPK
NVKHSGNIQLDEIIXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXX
|
| M: |
QNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTP
VQSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGLK
VKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGM
DFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQ
KYDADVLD
|
| N: |
AISKNLPILKNHFRKHWQERVKVHFDQAGKKVSRRNARAT
RAAKIAPRPLDLLRPVVRAPTVKYNRKVRAGRGFTLAEVK
AAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQRLKEYQS
KIIVFPRNGKAPEAEQVLSAAATFPIAQPATDVEARAVQD
NGESAFRTLRLARSEKKFRGIREKRAREKAEAE
|
| O: |
TDSIVKASNWRLVEVGRVVLIKKGQSAGKLAAIVEIIDQK
KVLIDGPKAGVPRQAINLGQVVLTPLTFALPRGARTATVS
KKWAAAAVCEKWAASSWAKKIAQRERRAALTDFERFQVMV
LRKQKRYTVKKALAKA
|
| Q: |
VNVPKTRKTYCKGKTCRKHTQHKVTQYKAGKASLFAQGKR
RYDRKQSGFGGQTKPVFHKKAKTTKKVVLRLECVKCKTRA
QLTLKRCKHFELGGEKKQKGQA
|
| R: |
AKRTKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSF
CGKKTVKRGAAGIWTCSCCKKTVAGGAYTVSTAAAATVRS
TIRRLREM
|
| S: |
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXX
|
| V: |
QHQNAATLLCCNCGTPIDGSTGLVMCYDCIKLTVDITQGI
PREANISFCRNCERFLQPPGQWIRAELESRELLAICLRRL
KGLTKVRLVDASFIWTEPHSRRIRIKLTVQGEAMTNTIIQ
QTFEVEYIVIAMQCPDCARSYTTNTWRATVQIRQKVPHKR
TFLFLEQLILKHNAHVDTISISEAKDGLDFFYAQKNHAVK
MIDFLNAVVPIKHKKSEELISQDTHTGASTYKFSYSVEIV
PICKDDLVVLPKKLAKSMGNISQFVLCSKISNTVQFMDPT
TLQTADLSPSVYWRAPFNALADVTQLVEFIVLDVDSTGIS
RGNRVLADITVARTSDLGVNDQVYYVRSHLGGICHAGDSV
MGYFIANSNYNSDLFDGLNIDYVPDVVLVKKLY
|
| X: |
MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEA
ELGDAIPIVHTTIAGTRIIGRMTAGNRRGLLVPTQTTDQE
LQHLRNSLPDSVKIQRVEERLSALGNVICCNDYVALVHPD
IDRETEELISDVLGVEVFRQTISGNILVGSYCSLSNQGGL
VHPQTSVQDQEELSSLLQVPLVAGTVNRGSSVVGAGMVVN
DYLAVTGLDTTAPELSVIESIFRLQDESISGNLR
|
| Y: |
SKVTAVRCKKCRTKLALSTSFIAHDPPSKESSEGHFIKRA
ANSHRIIDIQESQANCSHFFIEPLKWMQPELQGKQELEGK
FSCPGCSSKVGGYNWKGSRCSCGKWVIPAIHLQTSKVDQF
PLQSTALP
|
| a: |
GAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRAAR
PTRPDKARRLGYKAKQGFVIYRVRVRRGNRKRPVPKGATY
GKPTNQGVNELKYQRSLRATAEERVGRRAANLRVLNSYWV
NQDSTYKYFEVILVDPQHKAIRRDARYNWICDPVHKHREA
RGLTATGKKSRGINKGHKFNNTKAGRRKTWKRQNTLSLWR
YRK
|
| b: |
VEPVVVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELN
ISGEFFRNKLKYHDFLRKATAFNKTRGPFHFRAPSRIFYK
ALRGMVSHKTARGKAALERLKVFEGIPPPYDKKKRVVVPQ
ALRVLRLKPGRKYTTLGKLSTSVGWKYEDVVAKLEAKRKV
SSAEYYAKKRAFTKKVASANATAAESDVAKQLAALGY
|
| c: |
ARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWEL
TKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGKEFGVTKA
RWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQ
APKQRRRTYRAHGRINKYESSPSHIELVVTEKEEAVAKAA
EKKVVRLTSRQRGRIAAQKRIAA
|
| d: |
GIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTD
APFNKVVLKALFLSKINRPPVSVSRIARALKQEGAANKTV
VVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGEC
ITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMGPHKGK
APRILSTGRKFERARGRRRSKGFKV
|
| e: |
ANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAI
RKLVKNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGKR
KGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYH
VLYKESKGNAFKHKRALVEHIIQAKADAQRE
|
| f: |
HFKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYW
YFLQKLHKVKKASGEIVSINQINEAHPTKVKNFGVWVRYD
SRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSIH
ILKVAEIEKTADVKRQYVKQFLTKDLKFPLPHRVQKSTKT
FSYKRPSTFY
|
| g: |
GKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVD
IKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVG
NRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKA
QGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYETFI
|
| h: |
IAKTFTVDVSSPTENGVFDPASYAKYLIDHIKVEGAVGNL
GNAVTVTEDGTVVTVVSTAKFSGKYLKYLTKKYLKKNQLR
DWIRFVSTKTNEYRLAF
|
| i: |
AQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSR
LNRLPAASLGDMVMATVKKGKPELRKKVMPAIVVRQAKSW
RRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECADL
WPRVASNSGVVV
|
| j: |
MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLF
KQRKNPRRIAWTVLFRKHHKK
|
| k: |
KALKVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYK
VIEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKE
LYEVDVLKVNTLVRPNGTKKAYVRLTADYDALDIANRIGY
I
|
| l: |
AKQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRA
QYGIKALPIRRDDEVLVVRGSKKGQEGKISSVYRLKFAVQ
VDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQR
KGGKL
|
| m: |
AKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHA
LVAGIERYPLKVTKKHGAKKVAKRTKIKPFIKVVNYNHLL
PTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEER
HQAGKNQWFFSKLRF
|
| n: |
PSRFTKTRKHRGHVSAGKGRIGKHRKHPGGRGMAGGQHHH
RINMDKYHPGYFGKVGMRYFHKQQAHFWKPVLNLDKLWTL
IPEDKRDQYLKSASKETAPVIDTLAAGYGKILGKGRIPNV
PVIVKARFVSKLAEEKIRAAGGVVELIA
|
| o: |
AKSKNHTAHNQTRKAHRNGIKKPKTYKYPSLKGVDPKFRR
NHKHALHGTAKALAAAKK
|
| p: |
SINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANT
PVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVG
VVSILEAGDSDILTTL
|
| q: |
LKDVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLH
MGTDDVRLAPELNQAIWKRGVKGVEYRLRLRISRKRNEEE
DAKNPLFSYVEPVLVASAKGLQTVVVE
|
| r: |
ASLPHPKIVKKHTKKFKRHHSDRYHRVAENWRKQKGIDSV
VRRRFRGNISQPKIGYGSNKKTKFLSPSGHKTFLVANVKD
LETLTMHTKTYAAEIAHNISAKNRVVILARAKALGIKVTN
PKGRLA
|
| s: |
AESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQDA
QFYLGKRIAYVYRASKEVRGSKIRVMWGKVTRTHGNSGVV
RATFRNNLPAKTFGASVRIFLYPSNI
|
| t: |
AQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATR
PKCGDCGSALQGISTLRPRQYATVSKTHKTVSRAYGGSRC
ANCVKERIIRAFLIEEQKIVKKVVKEQTE
|
| u: |
AGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRPSL
PKIKTVRKSIACVLTVINEQQREAVRQLYKGKKYQPKDLR
AKKTRALRRALTKFEASQVTEKQRKKQIAFPQRKYAIKA
|
| v: |
VKTGIAIGLNKGKKVTSMTPAPKISYKKGAASNRTKFVRS
LVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSFTR
AKAKVEEMNNIIAASRRH
|
| w: |
GKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPA
AKTRSYNWGAKAKRRHTTGTGRMRYLKHVSRRFKNGFQTG
SASK
|
| x: |
AREITDIKQFLELTRRADVKTATVKINKKLNKAGKPFRQT
KFKVRGSSSLYTLVINDAGKAKKLIQSLPPTLKVNRL
|
| y: |
AAQKSFRIKQKMAKAKKQNRPLPQWIRLRTNNTIRYNAKR
RNWRRTKMNI
|
| z: |
IIEPSLKALASKYNCDKSVCRKCYARLPPRATNCRKRKCG
HTNQLRPKKKL
|
|
|
Description
|
(1) |
pre-60S ribosomal subunit
|
|
|
|
|
1)
|
chain |
i |
| residue |
76-102 |
| type |
prosite |
| sequence |
AIVVRQAKSWRRRDGVFLYFEDNAGVI
|
| description |
RIBOSOMAL_L14 Ribosomal protein L14 signature. AIVVrqakswrrr.DGvflyFedNagVI
|
| source |
prosite : PS00049
|
|
|
2)
|
chain |
k |
| residue |
120-135 |
| type |
prosite |
| sequence |
KKAYVRLTADYDALDI
|
| description |
RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVRLTadydaldI
|
| source |
prosite : PS00050
|
|
|
3)
|
chain |
y |
| residue |
30-46 |
| type |
prosite |
| sequence |
RTNNTIRYNAKRRNWRR
|
| description |
RIBOSOMAL_L39E Ribosomal protein L39e signature. RTnntIryNakrRNWRR
|
| source |
prosite : PS00051
|
|
|
4)
|
chain |
M |
| residue |
37-53 |
| type |
prosite |
| sequence |
LEQLSGQTPVQSKARYT
|
| description |
RIBOSOMAL_L5 Ribosomal protein L5 signature. LeqLSGQtpVqSkARyT
|
| source |
prosite : PS00358
|
|
|
5)
|
chain |
c |
| residue |
126-150 |
| type |
prosite |
| sequence |
RRRTYRAHGRINKYESSPSHIELVV
|
| description |
RIBOSOMAL_L22 Ribosomal protein L22 signature. RrrTyRAhGRinkyesspSHIELvV
|
| source |
prosite : PS00464
|
|
|
6)
|
chain |
D |
| residue |
197-208 |
| type |
prosite |
| sequence |
PKTRGVAMNPVD
|
| description |
RIBOSOMAL_L2 Ribosomal protein L2 signature. PktRGVAmNPvD
|
| source |
prosite : PS00467
|
|
|
7)
|
chain |
E |
| residue |
209-232 |
| type |
prosite |
| sequence |
FEQNEMIDAIAVTKGHGFEGVTHR
|
| description |
RIBOSOMAL_L3 Ribosomal protein L3 signature. FeqnemiDaiAvTkGHGfeGvthR
|
| source |
prosite : PS00474
|
|
|
8)
|
chain |
n |
| residue |
111-142 |
| type |
prosite |
| sequence |
KILGKGRIPNVPVIVKARFVSKLAEEKIRAAG
|
| description |
RIBOSOMAL_L15 Ribosomal protein L15 signature. KILGkGrIpnvp.ViVkarfVSklAeekIraaG
|
| source |
prosite : PS00475
|
|
|
9)
|
chain |
e |
| residue |
7-26 |
| type |
prosite |
| sequence |
QKRLAASVVGVGKRKVWLDP
|
| description |
RIBOSOMAL_L19E Ribosomal protein L19e signature. QKRLaAsvvgVGkrkVWLDP
|
| source |
prosite : PS00526
|
|
|
10)
|
chain |
u |
| residue |
40-54 |
| type |
prosite |
| sequence |
SLPKIKTVRKSIACV
|
| description |
RIBOSOMAL_L29 Ribosomal protein L29 signature. SLPKIKtVRKSIACV
|
| source |
prosite : PS00579
|
|
|
11)
|
chain |
r |
| residue |
17-37 |
| type |
prosite |
| sequence |
FKRHHSDRYHRVAENWRKQKG
|
| description |
RIBOSOMAL_L32E Ribosomal protein L32e signature. FkRhhsdRyhRVaen..WRKqkG
|
| source |
prosite : PS00580
|
|
|
12)
|
chain |
I |
| residue |
102-134 |
| type |
prosite |
| sequence |
VLQLLRLTRINSGTFVKVTKATLELLKLIEPYV
|
| description |
RIBOSOMAL_L30 Ribosomal protein L30 signature. VLqlLrLtRinSgTfvkvtkatleLLklIepYV
|
| source |
prosite : PS00634
|
|
|
13)
|
chain |
K |
| residue |
163-184 |
| type |
prosite |
| sequence |
QICRVRNKDIRKFLDGIYVSHK
|
| description |
RIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QicrVrnKdiRkFlDGIYVshK
|
| source |
prosite : PS00700
|
|
|
14)
|
chain |
p |
| residue |
20-44 |
| type |
prosite |
| sequence |
SGKYTLGYKSTVKSLRQGKSKLIII
|
| description |
RIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkytlGyKstVKslRqGksKlIII
|
| source |
prosite : PS00709
|
|
|
15)
|
chain |
b |
| residue |
84-107 |
| type |
prosite |
| sequence |
LRGMVSHKTARGKAALERLKVFEG
|
| description |
RIBOSOMAL_L13 Ribosomal protein L13 signature. LRGMVShktarGKaalerLkVFeG
|
| source |
prosite : PS00783
|
|
|
16)
|
chain |
F |
| residue |
114-140 |
| type |
prosite |
| sequence |
NHNEKRYATASAIAATAVASLVLARGH
|
| description |
RIBOSOMAL_L1E Ribosomal protein L1e signature. NhneKryATaSAIaATAvaslvlaRGH
|
| source |
prosite : PS00939
|
|
|
17)
|
chain |
p |
| residue |
76-96 |
| type |
prosite |
| sequence |
ELGTAVGKLFRVGVVSILEAG
|
| description |
RIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. ELGTavGKlfrvgvVsIlEaG
|
| source |
prosite : PS00993
|
|
|
18)
|
chain |
j |
| residue |
8-25 |
| type |
prosite |
| sequence |
FSGAKIYPGRGTLFVRGD
|
| description |
RIBOSOMAL_L24E Ribosomal protein L24e signature. FsGakIyPGrGtlFvRgD
|
| source |
prosite : PS01073
|
|
|
19)
|
chain |
w |
| residue |
4-23 |
| type |
prosite |
| sequence |
GTPSFGKRHNKSHTLCNRCG
|
| description |
RIBOSOMAL_L37E Ribosomal protein L37e signature. GTpSfGkRhnks.HtlCnRCG
|
| source |
prosite : PS01077
|
|
|
20)
|
chain |
J |
| residue |
170-187 |
| type |
prosite |
| sequence |
CKKMGVPYAIVKGKARLG
|
| description |
RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CkkmgVPYaiVkGKarLG
|
| source |
prosite : PS01082
|
|
|
21)
|
chain |
N |
| residue |
70-84 |
| type |
prosite |
| sequence |
RAGRGFTLAEVKAAG
|
| description |
RIBOSOMAL_L13E Ribosomal protein L13e signature. RaGRGFTLaEVkaaG
|
| source |
prosite : PS01104
|
|
|
22)
|
chain |
s |
| residue |
69-90 |
| type |
prosite |
| sequence |
GKVTRTHGNSGVVRATFRNNLP
|
| description |
RIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKVtRtHGnsGvVrAtFrnnLP
|
| source |
prosite : PS01105
|
|
|
23)
|
chain |
d |
| residue |
50-67 |
| type |
prosite |
| sequence |
KALFLSKINRPPVSVSRI
|
| description |
RIBOSOMAL_L18E Ribosomal protein L18e signature. KaLflSKinRPpVSVsRI
|
| source |
prosite : PS01106
|
|
|
24)
|
chain |
m |
| residue |
125-136 |
| type |
prosite |
| sequence |
GKNQWFFSKLRF
|
| description |
RIBOSOMAL_L27E Ribosomal protein L27e signature. GKNqWFFskLRF
|
| source |
prosite : PS01107
|
|
|
25)
|
chain |
l |
| residue |
53-70 |
| type |
prosite |
| sequence |
DDEVLVVRGSKKGQEGKI
|
| description |
RIBOSOMAL_L24 Ribosomal protein L24 signature. DDeVlVVrGskKGqe.GkI
|
| source |
prosite : PS01108
|
|
|
26)
|
chain |
q |
| residue |
49-63 |
| type |
prosite |
| sequence |
VRLAPELNQAIWKRG
|
| description |
RIBOSOMAL_L31E Ribosomal protein L31e signature. VRLApeLNqAiWkRG
|
| source |
prosite : PS01144
|
|
|
27)
|
chain |
t |
| residue |
15-28 |
| type |
prosite |
| sequence |
TRSNKIKVVKTPGG
|
| description |
RIBOSOMAL_L34E Ribosomal protein L34e signature. TrSnKikvvKTPGG
|
| source |
prosite : PS01145
|
|
|
28)
|
chain |
H |
| residue |
72-90 |
| type |
prosite |
| sequence |
NGVPLRRVNARYVIATSTK
|
| description |
RIBOSOMAL_L6E Ribosomal protein L6e signature. NgvPLRRvnarYVIATSt.K
|
| source |
prosite : PS01170
|
|
|
29)
|
chain |
g |
| residue |
37-62 |
| type |
prosite |
| sequence |
GDIVDIKANGSIQKGMPHKFYQGKTG
|
| description |
RIBOSOMAL_L21E Ribosomal protein L21e signature. GDiVdikangsiqk.GmpHkfYqGkTG
|
| source |
prosite : PS01171
|
|
|
30)
|
chain |
Q |
| residue |
63-74 |
| type |
prosite |
| sequence |
KTTKKVVLRLEC
|
| description |
RIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKvvLRleC
|
| source |
prosite : PS01172
|
|
|
31)
|
chain |
v |
| residue |
52-62 |
| type |
prosite |
| sequence |
PYERRLIDLIR
|
| description |
RIBOSOMAL_L36E Ribosomal protein L36e signature. PYERRlIDLIR
|
| source |
prosite : PS01190
|
|
|
32)
|
chain |
a |
| residue |
46-69 |
| type |
prosite |
| sequence |
DKARRLGYKAKQGFVIYRVRVRRG
|
| description |
RIBOSOMAL_L15E Ribosomal protein L15e signature. DKARrLGYkAkqGFVIYRvRVrRG
|
| source |
prosite : PS01194
|
|
|
33)
|
chain |
X |
| residue |
175 |
| type |
MOD_RES |
| sequence |
S
|
| description |
N,N-dimethylproline; by NTM1 => ECO:0000269|PubMed:18957409, ECO:0000269|PubMed:20481588
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
34)
|
chain |
p |
| residue |
53 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N,N-dimethylproline; by NTM1 => ECO:0000269|PubMed:18957409, ECO:0000269|PubMed:20481588
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
35)
|
chain |
p |
| residue |
83 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N,N-dimethylproline; by NTM1 => ECO:0000269|PubMed:18957409, ECO:0000269|PubMed:20481588
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
36)
|
chain |
z |
| residue |
93 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6,N6,N6-trimethyllysine; by RKM2 => ECO:0000269|PubMed:17005568, ECO:0000269|PubMed:18957409
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
37)
|
chain |
w |
| residue |
34 |
| type |
MOD_RES |
| sequence |
C
|
| description |
N6,N6,N6-trimethyllysine; by RKM2 => ECO:0000269|PubMed:17005568, ECO:0000269|PubMed:18957409
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
38)
|
chain |
w |
| residue |
37 |
| type |
MOD_RES |
| sequence |
C
|
| description |
N6,N6,N6-trimethyllysine; by RKM2 => ECO:0000269|PubMed:17005568, ECO:0000269|PubMed:18957409
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
39)
|
chain |
e |
| residue |
146 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6,N6,N6-trimethyllysine; by RKM2 => ECO:0000269|PubMed:17005568, ECO:0000269|PubMed:18957409
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
40)
|
chain |
L |
| residue |
11 |
| type |
MOD_RES |
| sequence |
X
|
| description |
N6,N6,N6-trimethyllysine; by RKM2 => ECO:0000269|PubMed:17005568
|
| source |
Swiss-Prot : SWS_FT_FI3
|
|
|
41)
|
chain |
D |
| residue |
93 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6,N6,N6-trimethyllysine; by RKM2 => ECO:0000269|PubMed:17005568
|
| source |
Swiss-Prot : SWS_FT_FI3
|
|
|
42)
|
chain |
D |
| residue |
119 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6,N6,N6-trimethyllysine; by RKM2 => ECO:0000269|PubMed:17005568
|
| source |
Swiss-Prot : SWS_FT_FI3
|
|
|
43)
|
chain |
D |
| residue |
145 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6,N6,N6-trimethyllysine; by RKM2 => ECO:0000269|PubMed:17005568
|
| source |
Swiss-Prot : SWS_FT_FI3
|
|
|
44)
|
chain |
L |
| residue |
25 |
| type |
MOD_RES |
| sequence |
X
|
| description |
Phosphoserine => ECO:0007744|PubMed:19779198
|
| source |
Swiss-Prot : SWS_FT_FI4
|
|
|
45)
|
chain |
L |
| residue |
38 |
| type |
MOD_RES |
| sequence |
X
|
| description |
Phosphoserine => ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
|
| source |
Swiss-Prot : SWS_FT_FI5
|
|
|
46)
|
chain |
E |
| residue |
136 |
| type |
MOD_RES |
| sequence |
K
|
| description |
Phosphoserine => ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
|
| source |
Swiss-Prot : SWS_FT_FI5
|
|
|
47)
|
chain |
L |
| residue |
67 |
| type |
MOD_RES |
| sequence |
R
|
| description |
N5-methylarginine; by RMT2 => ECO:0000269|PubMed:11856739, ECO:0000269|PubMed:18957409
|
| source |
Swiss-Prot : SWS_FT_FI6
|
|