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eF-site ID
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6n8m-D |
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PDB Code
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6n8m |
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Chain
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D |
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click to enlarge
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Title
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Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunit |
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Classification
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RIBOSOME |
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Compound
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Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA |
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Source
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ORGANISM_COMMON: Baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); |
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Sequence
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D: |
GRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYI
RGIVKQIVHDSGRGAPLAKVVFRDPYKYRLREEIFIANEG
VHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPG
DRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSD
ARGVIGVIAGGGRVDKPLLKAGRAFHKYRLKRNSWPKTRG
VAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAAR
RTGLLR
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Description
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(1) |
pre-60S ribosomal subunit
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Functional site
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1)
|
chain |
D |
| residue |
197-208 |
| type |
prosite |
| sequence |
PKTRGVAMNPVD
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| description |
RIBOSOMAL_L2 Ribosomal protein L2 signature. PktRGVAmNPvD
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| source |
prosite : PS00467
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2)
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chain |
D |
| residue |
93 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6,N6,N6-trimethyllysine; by RKM2 => ECO:0000269|PubMed:17005568
|
| source |
Swiss-Prot : SWS_FT_FI3
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3)
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chain |
D |
| residue |
119 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6,N6,N6-trimethyllysine; by RKM2 => ECO:0000269|PubMed:17005568
|
| source |
Swiss-Prot : SWS_FT_FI3
|
|
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4)
|
chain |
D |
| residue |
145 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6,N6,N6-trimethyllysine; by RKM2 => ECO:0000269|PubMed:17005568
|
| source |
Swiss-Prot : SWS_FT_FI3
|
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