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eF-site ID
|
6n61-F |
PDB Code
|
6n61 |
Chain
|
F |
|
click to enlarge
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Title
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Escherichia coli RNA polymerase sigma70-holoenzyme bound to upstream fork promoter DNA and Capistruin |
Classification
|
TRANSFERASE/DNA |
Compound
|
DNA-directed RNA polymerase subunit alpha |
Source
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(A0A096YQF1_BURTA) |
|
Sequence
|
F: |
TTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCS
VAEVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMP
KKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVSEEVH
RALQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKE
MVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK
FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIE
TINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVL
KIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTE
SLRAATHDVLAGLTAREAKVLRMRFGIDMNTDYTLEEVGK
QFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD
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Description
|
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Functional site
|
|
1)
|
chain |
F |
residue |
403-416 |
type |
prosite |
sequence |
DLIQEGNIGLMKAV
|
description |
SIGMA70_1 Sigma-70 factors family signature 1. DLIQeGnIGLMkAV
|
source |
prosite : PS00715
|
|
2)
|
chain |
F |
residue |
572-598 |
type |
prosite |
sequence |
TLEEVGKQFDVTRERIRQIEAKALRKL
|
description |
SIGMA70_2 Sigma-70 factors family signature 2. TleEVGkqfdVTrerIrQIEakaLrkL
|
source |
prosite : PS00716
|
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