eF-site ID 6n5e-BCFGHI PDB Code 6n5e Chain B, C, F, G, H, I click to enlarge Title Broadly protective antibodies directed to a subdominant influenza hemagglutinin epitope Classification VIRAL PROTEIN/IMMUNE SYSTEM Compound Hemagglutinin Source (6N5E) Sequence B:  TNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHC DVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSG TLEFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTK SGSTYPVLNVTMPNNDNFDKLYIWGIHHPSTDQEQTSLYV QASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTI VKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDT CISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKL AT C:  ATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDV FQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTL EFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSG STYPVLNVTMPNNDNFDKLYIWGIHHPSTDQEQTSLYVQA SGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVK PGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCI SECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLK F:  QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQE KPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGA QTEDEAIYFCALWFSNHWVFGGGTKLTVLGQPKGAPSVTL FPPSSEELQANKATLVCLISDFYPGAVTVAKAGVETTTPS KQSNNKYAASSYLSLTHRSYSCQVTHEGSTVEKTVAP G:  DVKLVESGEGLVKPGGSLKLSCAASGFTFSGYDMSWVRQT PEKRLEWVAYISSIYYADTVKGRFTISRDNARNTLYLQMS SLKSEDTAMYYCTRDSDYYGSRVWFAYWGQGTLVTVSGAS TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWN SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYI CNVNHKPSNTKVDKRVEPKSCD H:  DVKLVESGEGLVKPGGSLKLSCAASGFTFSGYDMSWVRQT PEKRLEWVAYISSGGDYIYYADTVKGRFTISRDNARNTLY LQMSSLKSEDTAMYYCTRDSDYYGSRVWFAYWGQGTLVTV SGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT QTYICNVNHKPSNTKVDKRVEPKSC I:  QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQE KPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGA QTEDEAIYFCALWFSNHWVFGGGTKLTVLGQPKGAPSVTL FPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKA GVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTH EGSTVEKTVAP Description Functional site 1) chain C residue 81 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 2) chain C residue 165 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 3) chain C residue 285 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 4) chain B residue 38 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 5) chain B residue 81 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 6) chain B residue 165 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 7) chain B residue 285 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072 source Swiss-Prot : SWS_FT_FI1 8) chain H residue 202-208 type prosite sequence YICNVNH description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH source prosite : PS00290 9) chain I residue 194-200 type prosite sequence YSCQVTH description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH source prosite : PS00290

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